Two novel bacteriophage genera from a groundwater reservoir highlight subsurface environments as underexplored biotopes in bacteriophage ecology.


Journal

Scientific reports
ISSN: 2045-2322
Titre abrégé: Sci Rep
Pays: England
ID NLM: 101563288

Informations de publication

Date de publication:
17 07 2020
Historique:
received: 04 12 2019
accepted: 12 06 2020
entrez: 19 7 2020
pubmed: 19 7 2020
medline: 22 12 2020
Statut: epublish

Résumé

Although bacteriophages are central entities in bacterial ecology and population dynamics, there is currently no literature on the genomes of bacteriophages isolated from groundwater. Using a collection of bacterial isolates from an aquifer as hosts, this study isolated, sequenced and characterised two bacteriophages native to the groundwater reservoir. Host phylogenetic analyses revealed that the phages targeted B. mycoides and a novel Pseudomonas species. These results suggest that both bacteriophages represent new genera, highlighting that groundwater reservoirs, and probably other subsurface environments as well, are underexplored biotopes in terms of the presence and ecology of bacteriophages.

Identifiants

pubmed: 32681144
doi: 10.1038/s41598-020-68389-1
pii: 10.1038/s41598-020-68389-1
pmc: PMC7368026
doi:

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

11879

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Auteurs

Ole Hylling (O)

Department of Environmental Science, Aarhus University, Frederiksborgvej 399, 4000, Roskilde, Denmark.

Alexander B Carstens (AB)

Department of Environmental Science, Aarhus University, Frederiksborgvej 399, 4000, Roskilde, Denmark.
Department of Plant- and Environmental Sciences, Section for Microbial Ecology and Biotechnology, University of Copenhagen, Copenhagen, Denmark.

Witold Kot (W)

Department of Environmental Science, Aarhus University, Frederiksborgvej 399, 4000, Roskilde, Denmark.
Department of Plant- and Environmental Sciences, Section for Microbial Ecology and Biotechnology, University of Copenhagen, Copenhagen, Denmark.

Martin Hansen (M)

Department of Environmental Science, Aarhus University, Frederiksborgvej 399, 4000, Roskilde, Denmark.

Horst Neve (H)

Department of Microbiology and Biotechnology, Max Rubner-Institut, Hermann-Weigmann-Straße 1, 24103, Kiel, Germany.

Charles M A P Franz (CMAP)

Department of Microbiology and Biotechnology, Max Rubner-Institut, Hermann-Weigmann-Straße 1, 24103, Kiel, Germany.

Anders Johansen (A)

Department of Environmental Science, Aarhus University, Frederiksborgvej 399, 4000, Roskilde, Denmark.

Lea Ellegaard-Jensen (L)

Department of Environmental Science, Aarhus University, Frederiksborgvej 399, 4000, Roskilde, Denmark.

Lars H Hansen (LH)

Department of Environmental Science, Aarhus University, Frederiksborgvej 399, 4000, Roskilde, Denmark. lhha@plen.ku.dk.
Department of Plant- and Environmental Sciences, Section for Microbial Ecology and Biotechnology, University of Copenhagen, Copenhagen, Denmark. lhha@plen.ku.dk.

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