PEARL-seq: A Photoaffinity Platform for the Analysis of Small Molecule-RNA Interactions.


Journal

ACS chemical biology
ISSN: 1554-8937
Titre abrégé: ACS Chem Biol
Pays: United States
ID NLM: 101282906

Informations de publication

Date de publication:
18 09 2020
Historique:
pubmed: 18 8 2020
medline: 9 6 2021
entrez: 18 8 2020
Statut: ppublish

Résumé

RNA is emerging as a valuable target for the development of novel therapeutic agents. The rational design of RNA-targeting small molecules, however, has been hampered by the relative lack of methods for the analysis of small molecule-RNA interactions. Here, we present our efforts to develop such a platform using photoaffinity labeling. This technique, termed

Identifiants

pubmed: 32804474
doi: 10.1021/acschembio.0c00357
doi:

Substances chimiques

Aptamers, Nucleotide 0
Azides 0
Ligands 0
Photoaffinity Labels 0
Diazomethane 60A625P70P
RNA 63231-63-0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

2374-2381

Auteurs

Herschel Mukherjee (H)

Arrakis Therapeutics, 830 Winter Street, Waltham, Massachusetts, United States.

J Craig Blain (JC)

Arrakis Therapeutics, 830 Winter Street, Waltham, Massachusetts, United States.

Lee E Vandivier (LE)

Arrakis Therapeutics, 830 Winter Street, Waltham, Massachusetts, United States.

Donovan N Chin (DN)

Arrakis Therapeutics, 830 Winter Street, Waltham, Massachusetts, United States.

Jessica E Friedman (JE)

Arrakis Therapeutics, 830 Winter Street, Waltham, Massachusetts, United States.

Fei Liu (F)

Arrakis Therapeutics, 830 Winter Street, Waltham, Massachusetts, United States.

Ashley Maillet (A)

Arrakis Therapeutics, 830 Winter Street, Waltham, Massachusetts, United States.

Chao Fang (C)

Arrakis Therapeutics, 830 Winter Street, Waltham, Massachusetts, United States.

Jenifer B Kaplan (JB)

Arrakis Therapeutics, 830 Winter Street, Waltham, Massachusetts, United States.

Jinxing Li (J)

Department of Chemistry, University of Pennsylvania, 231 South 34th Street, Philadelphia, Pennsylvania, United States.

David M Chenoweth (DM)

Department of Chemistry, University of Pennsylvania, 231 South 34th Street, Philadelphia, Pennsylvania, United States.

Allan Beck Christensen (AB)

Vipergen, Gammel Kongevej 23A, Copenhagen, Denmark.

Lars Kolster Petersen (LK)

Vipergen, Gammel Kongevej 23A, Copenhagen, Denmark.

Nils Jakob Vest Hansen (NJV)

Vipergen, Gammel Kongevej 23A, Copenhagen, Denmark.

Luis Barrera (L)

Arrakis Therapeutics, 830 Winter Street, Waltham, Massachusetts, United States.

Neil Kubica (N)

Arrakis Therapeutics, 830 Winter Street, Waltham, Massachusetts, United States.

Gnanasambandam Kumaravel (G)

Arrakis Therapeutics, 830 Winter Street, Waltham, Massachusetts, United States.

Jennifer C Petter (JC)

Arrakis Therapeutics, 830 Winter Street, Waltham, Massachusetts, United States.

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Classifications MeSH