High-throughput Minitaturized RNA-Seq Library Preparation.


Journal

Journal of biomolecular techniques : JBT
ISSN: 1943-4731
Titre abrégé: J Biomol Tech
Pays: United States
ID NLM: 100888641

Informations de publication

Date de publication:
12 2020
Historique:
pubmed: 27 10 2020
medline: 10 8 2021
entrez: 26 10 2020
Statut: ppublish

Résumé

Advances in next-generation sequencing technologies have allowed RNA sequencing to become an increasingly time efficient, cost-effective, and accessible tool for genomic research. We present here an automated and miniaturized workflow for RNA library preparation that minimizes reagent usage and processing time required per sample to generate Illumina compatible libraries for sequencing. The reduced-volume libraries show similar behavior to full-scale libraries with comparable numbers of genes detected and reproducible clustering of samples.

Identifiants

pubmed: 33100919
doi: 10.7171/jbt.20-3104-004
pii: JBT_2020-3104-004
pmc: PMC7566612
doi:

Substances chimiques

RNA 63231-63-0

Types de publication

Journal Article Research Support, N.I.H., Extramural

Langues

eng

Sous-ensembles de citation

IM

Pagination

151-156

Subventions

Organisme : NCI NIH HHS
ID : P30 CA014051
Pays : United States
Organisme : NIEHS NIH HHS
ID : P30 ES002109
Pays : United States

Informations de copyright

© Association of Biomolecular Resource Facilities.

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Auteurs

Samuel Mildrum (S)

Department of Biology, MIT BioMicro Center, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA.

Austin Hendricks (A)

Department of Biology, MIT BioMicro Center, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA.

Alexei Stortchevoi (A)

Department of Biology, MIT BioMicro Center, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA.

Noelani Kamelamela (N)

Department of Biology, MIT BioMicro Center, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA.

Vincent L Butty (VL)

Department of Biology, MIT BioMicro Center, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA.

Stuart S Levine (SS)

Department of Biology, MIT BioMicro Center, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA.

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Classifications MeSH