Combination of Sanger and target-enrichment markers supports revised generic delimitation in the problematic 'Urera clade' of the nettle family (Urticaceae).


Journal

Molecular phylogenetics and evolution
ISSN: 1095-9513
Titre abrégé: Mol Phylogenet Evol
Pays: United States
ID NLM: 9304400

Informations de publication

Date de publication:
05 2021
Historique:
received: 09 10 2019
revised: 20 10 2020
accepted: 29 10 2020
pubmed: 8 11 2020
medline: 22 6 2021
entrez: 7 11 2020
Statut: ppublish

Résumé

Urera Gaudich, s.l. is a pantropical genus comprising c. 35 species of trees, shrubs, and vines. It has a long history of taxonomic uncertainty, and is repeatedly recovered as polyphyletic within a poorly resolved complex of genera in the Urticeae tribe of the nettle family (Urticaceae). To provide generic delimitations concordant with evolutionary history, we use increased taxonomic and genomic sampling to investigate phylogenetic relationships among Urera and associated genera. A cost-effective two-tier genome-sampling approach provides good phylogenetic resolution by using (i) a taxon-dense sample of Sanger sequence data from two barcoding regions to recover clades of putative generic rank, and (ii) a genome-dense sample of target-enrichment data for a subset of representative species from each well-supported clade to resolve relationships among them. The results confirm the polyphyly of Urera s.l. with respect to the morphologically distinct genera Obetia, Poikilospermum and Touchardia. Afrotropic members of Urera s.l. are recovered in a clade sister to the xerophytic African shrubs Obetia; and Hawaiian ones with Touchardia, also from Hawaii. Combined with distinctive morphological differences between Neotropical and African members of Urera s.l., these results lead us to resurrect the previously synonymised name Scepocarpus Wedd. for the latter. The new species epiphet Touchardia oahuensis T.Wells & A.K. Monro is offered as a replacement name for Touchardia glabra non H.St.John, and subgenera are created within Urera s.s. to account for the two morphologically distinct Neotropical clades. This new classification minimises taxonomic and nomenclatural disruption, while more accurately reflecting evolutionary relationships within the group.

Identifiants

pubmed: 33160040
pii: S1055-7903(20)30280-3
doi: 10.1016/j.ympev.2020.107008
pii:
doi:

Substances chimiques

DNA, Plant 0
DNA, Ribosomal 0

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

107008

Informations de copyright

Copyright © 2020 Elsevier Inc. All rights reserved.

Auteurs

Tom Wells (T)

The Royal Botanic Garden Edinburgh, EH3 5NZ, United Kingdom; Oxford University, Department of Plant Sciences, OX1 3RB, United Kingdom. Electronic address: tom.wells@plants.ox.ac.uk.

Olivier Maurin (O)

The Royal Botanic Gardens, Kew, Plant and Fungal Tree of Life (PAFTOL) Team, TW9 3AE, United Kingdom.

Steven Dodsworth (S)

The Royal Botanic Gardens, Kew, Plant and Fungal Tree of Life (PAFTOL) Team, TW9 3AE, United Kingdom; School of Life Sciences, University of Bedfordshire, Luton LU1 3JU, United Kingdom.

Ib Friis (I)

Natural History Museum of Denmark, Universitetparken 15, DK-2100 Copenhagen Ø, Demark.

Robyn Cowan (R)

The Royal Botanic Gardens, Kew, Plant and Fungal Tree of Life (PAFTOL) Team, TW9 3AE, United Kingdom.

Niroshini Epitawalage (N)

The Royal Botanic Gardens, Kew, Plant and Fungal Tree of Life (PAFTOL) Team, TW9 3AE, United Kingdom.

Grace Brewer (G)

The Royal Botanic Gardens, Kew, Plant and Fungal Tree of Life (PAFTOL) Team, TW9 3AE, United Kingdom.

Felix Forest (F)

The Royal Botanic Gardens, Kew, Plant and Fungal Tree of Life (PAFTOL) Team, TW9 3AE, United Kingdom.

William J Baker (WJ)

The Royal Botanic Gardens, Kew, Plant and Fungal Tree of Life (PAFTOL) Team, TW9 3AE, United Kingdom.

Alexandre K Monro (AK)

The Royal Botanic Gardens, Kew, Identification & Naming Department, TW9 3AE, United Kingdom.

Articles similaires

Genome, Chloroplast Phylogeny Genetic Markers Base Composition High-Throughput Nucleotide Sequencing
Animals Hemiptera Insect Proteins Phylogeny Insecticides
Amaryllidaceae Alkaloids Lycoris NADPH-Ferrihemoprotein Reductase Gene Expression Regulation, Plant Plant Proteins

Classifications MeSH