Genera specific distribution of DEAD-box RNA helicases in cyanobacteria.
CrhR
DEAD-box RNA helicase
cyanobacteria
phylogenetic analysis
Journal
Microbial genomics
ISSN: 2057-5858
Titre abrégé: Microb Genom
Pays: England
ID NLM: 101671820
Informations de publication
Date de publication:
03 2021
03 2021
Historique:
pubmed:
5
2
2021
medline:
29
9
2021
entrez:
4
2
2021
Statut:
ppublish
Résumé
Although RNA helicases are essentially ubiquitous and perform roles in all stages of RNA metabolism, phylogenetic analysis of the DEAD (Asp-Glu-Ala-Asp)-box RNA helicase family in a single phylum has not been performed. Here, we performed a phylogenetic analysis on DEAD-box helicases from all currently available cyanobacterial genomes, comprising a total of 362 helicase protein sequences from 280 strains. DEAD-box helicases belonging to three distinct clades were observed. Two clades, the CsdA (cold shock DEAD-box A)-like and RhlE (RNA helicase E)-like helicases, cluster with the homologous proteins from
Identifiants
pubmed: 33539277
doi: 10.1099/mgen.0.000517
pmc: PMC8190605
doi:
Substances chimiques
Bacterial Proteins
0
DEAD-box RNA Helicases
EC 3.6.4.13
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
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