Draft genome sequence of Lactobacillus delbrueckii subsp. bulgaricus LBP UFSC 2230: a tool for preliminary identification of enzymes involved in CLA metabolism.

Cheese / microbiology Genome, Bacterial Italy Lactobacillus delbrueckii / genetics Linoleic Acids, Conjugated / metabolism
Bioprocess Functional food Genome sequencing Lactic acid bacteria Lactobacillus ssp. cis-9, trans-11 CLA

Journal

Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology]
ISSN: 1678-4405
Titre abrégé: Braz J Microbiol
Pays: Brazil
ID NLM: 101095924

Informations de publication

Date de publication:
Sep 2021
Historique:
received: 04 06 2020
accepted: 29 03 2021
pubmed: 24 4 2021
medline: 15 12 2021
entrez: 23 4 2021
Statut: ppublish

Résumé

Several Lactobacillus ssp. are recognized as potential conjugated linoleic acid (CLA) producers. We have previously reported the ability of a range of Lactobacillus delbrueckii subsp. bulgaricus strains to produce CLA in fermented milk, being a potential candidate for the fermented dairy food chain. This study reports the draft genome sequence of L. bulgaricus strain LBP UFSC 2230, isolated from Italian Grana Padano cheese. Draft genome sequence originated in a total of 4,310,842 paired-end reads that were quality trimmed and assembled into 135 contigs with a total length of 604,745,873 bp, including 2086 protein coding genes and an average GC content of 49.7%. Draft genome sequence represents an important tool to identify the enzymes involved in this strain's CLA metabolism. We identified a gene encoding an enzyme involved in biohydrogenation of linoleic acid pathway, oleate hydratase.

Identifiants

DOI: 10.1007/s42770-021-00479-2 PMID: 33891284 PMC: PMC8324633
pubmed: 33891284
doi: 10.1007/s42770-021-00479-2
pii: 10.1007/s42770-021-00479-2
pmc: PMC8324633
doi:

Substances chimiques

Linoleic Acids, Conjugated 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

1557-1563

Informations de copyright

© 2021. Sociedade Brasileira de Microbiologia.

Références

Med Oncol Tumor Pharmacother. 1990;7(2-3):169-71
pubmed: 2232933
Bioinformatics. 2011 Oct 1;27(19):2756-7
pubmed: 21810901
BMC Genomics. 2008 Feb 08;9:75
pubmed: 18261238
Sci Rep. 2016 Mar 04;6:22704
pubmed: 26940047
Proc Natl Acad Sci U S A. 2013 Oct 29;110(44):17808-13
pubmed: 24127592
Nat Methods. 2017 Feb;14(2):135-139
pubmed: 27941783
Appl Microbiol Biotechnol. 2013 Nov;97(22):9825-36
pubmed: 24127138
Int J Bacteriol. 2013;2013:
pubmed: 25750934
Atherosclerosis. 1994 Jul;108(1):19-25
pubmed: 7980704
Appl Microbiol Biotechnol. 2020 Feb;104(4):1401-1422
pubmed: 31900557

Auteurs

Gabriela Christina Kuhl (GC)

Department of Food Science and Technology, Federal University of Santa Catarina, Florianópolis, SC, 88034-001, Brazil.

Ricardo Ruiz Mazzon (RR)

Department of Microbiology, Immunology and Parasitology, Federal University of Santa Catarina, Florianópolis, SC, 88034-001, Brazil.

Rubens Tadeu Delgado Duarte (RTD)

Department of Microbiology, Immunology and Parasitology, Federal University of Santa Catarina, Florianópolis, SC, 88034-001, Brazil.

Juliano De Dea Lindner (J)

Department of Food Science and Technology, Federal University of Santa Catarina, Florianópolis, SC, 88034-001, Brazil. juliano.lindner@ufsc.br.
ORCID: 0000-0002-6191-8910

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Classifications MeSH

questionsmedicales.fr › Aliments et boissons › Aliments › Produits laitiers › Produits laitiers de culture › Fromage › Draft genome sequence of Lactobacillus...
questionsmedicales.fr › Phénomènes génétiques › Structures génétiques › Génome › Génome microbien › Génome bactérien › Draft genome sequence of Lactobacillus...
questionsmedicales.fr › Régions géographiques › Europe › Italie › Draft genome sequence of Lactobacillus...
questionsmedicales.fr › Bactéries › Bactéries à Gram positif › Lactobacillales › Lactobacillaceae › Lactobacillus › Lactobacillus delbrueckii › Draft genome sequence of Lactobacillus...
questionsmedicales.fr › Lipides › Acides gras › Acides gras insaturés › Acides gras omega-6 › Acides linoléiques › Acides linoléiques conjugués › Draft genome sequence of Lactobacillus...