Structure and biosynthesis of sorangipyranone - a new γ-dihydropyrone from the myxobacterial strain MSr12020.
Myxobacteria
Natural products
γ-Dihydropyrone
Journal
Journal of industrial microbiology & biotechnology
ISSN: 1476-5535
Titre abrégé: J Ind Microbiol Biotechnol
Pays: Germany
ID NLM: 9705544
Informations de publication
Date de publication:
04 Jun 2021
04 Jun 2021
Historique:
received:
14
12
2020
accepted:
13
05
2021
pubmed:
19
5
2021
medline:
20
7
2021
entrez:
18
5
2021
Statut:
ppublish
Résumé
Sorangipyranone was isolated as a novel natural product featuring a unique 2,3-dihydro-γ-4H-pyrone scaffold from cultures of the myxobacterial strain MSr12020. We report here the full structure elucidation of sorangipyranone by spectroscopic techniques including 2D NMR and high-resolution mass spectrometry together with the analysis of the biosynthetic pathway. Determination of the absolute configuration was performed by time-dependent density functional theory-electronic circular dichroism calculations and determination of the applicability of the Snatzke's helicity rule, to correlate the high-wavelength n→π* electronic circular dichroism (ECD) transition and the absolute configuration of the 2,3-dihydro-4H-γ-pyrone, was done by the analysis of low-energy conformers and the Kohn-Sham orbitals. Sorangipyranone outlines a new class of a γ-dihydropyrone-containing natural product comprised of malonyl-CoA-derived building blocks and features a unique polyketide scaffold. In silico analysis of the genome sequence of the myxobacterial strain MSr12020 complemented with feeding experiments employing stable isotope-labeled precursors allowed the identification and annotation of a candidate biosynthetic gene cluster that encodes a modular polyketide synthase assembly line. A model for the biosynthetic pathway leading to the formation of the γ-dihydropyrone scaffold is presented in this study.
Identifiants
pubmed: 34003283
pii: 6277809
doi: 10.1093/jimb/kuab029
pmc: PMC9113121
pii:
doi:
Substances chimiques
Biological Products
0
Polyketides
0
Polyketide Synthases
79956-01-7
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Informations de copyright
© The Author(s) 2021. Published by Oxford University Press on behalf of Society of Industrial Microbiology and Biotechnology.
Références
Nat Prod Rep. 2017 Feb 1;34(2):135-160
pubmed: 27907217
Org Lett. 2001 Jan 25;3(2):247-50
pubmed: 11430046
Phytochemistry. 2005 Sep;66(18):2177-215
pubmed: 16153414
Metab Eng. 2017 Nov;44:160-170
pubmed: 29030273
Bioinformatics. 2012 Jun 15;28(12):1647-9
pubmed: 22543367
J Nat Prod. 1998 May;61(5):677-80
pubmed: 9599278
Front Microbiol. 2016 May 26;7:781
pubmed: 27303375
Nucleic Acids Res. 2016 Jan 4;44(D1):D279-85
pubmed: 26673716
Mar Drugs. 2018 Aug 29;16(9):
pubmed: 30158489
Curr Top Microbiol Immunol. 2016;398:273-302
pubmed: 27704272
Org Lett. 2012 Jun 1;14(11):2854-7
pubmed: 22616796
Curr Med Chem. 2018;25(2):287-320
pubmed: 28294053
J Nat Prod. 2020 Mar 27;83(3):770-803
pubmed: 32162523
Nat Prod Rep. 2012 Oct;29(10):1238-50
pubmed: 22850796
Angew Chem Int Ed Engl. 2008;47(3):600-2
pubmed: 18058875
J Am Chem Soc. 2014 Aug 27;136(34):11853-9
pubmed: 25074019
Mar Drugs. 2018 Aug 17;16(8):
pubmed: 30126132
J Nat Prod. 2014 Feb 28;77(2):320-6
pubmed: 24460410
J Antibiot (Tokyo). 2002 Jun;55(6):543-51
pubmed: 12195959
Int J Med Microbiol. 2014 Jan;304(1):72-8
pubmed: 24079981
Microorganisms. 2018 Aug 11;6(3):
pubmed: 30103481
Metab Eng. 2019 Sep;55:201-211
pubmed: 31340171
Chembiochem. 2013 Sep 2;14(13):1581-9
pubmed: 23983106
J Chem Phys. 2008 Feb 28;128(8):084106
pubmed: 18315032
J Antibiot (Tokyo). 2006 Dec;59(12):785-90
pubmed: 17323645
ACS Chem Biol. 2019 Jan 18;14(1):88-98
pubmed: 30543288
J Am Chem Soc. 2010 Oct 27;132(42):14697-9
pubmed: 20925342
Chem Sci. 2015 Aug 1;6(8):5076-5085
pubmed: 29308173
Org Lett. 2014 Mar 7;16(5):1390-3
pubmed: 24533828
Chirality. 2010 Feb;22(2):229-33
pubmed: 19408332
J Nat Prod. 2014 Jun 27;77(6):1420-9
pubmed: 24848583
J Antibiot (Tokyo). 1995 Sep;48(9):973-6
pubmed: 7592065
Genome Res. 2017 May;27(5):722-736
pubmed: 28298431
Chembiochem. 2015 Apr 13;16(6):946-53
pubmed: 25757034
J Antibiot (Tokyo). 1992 Sep;45(9):1549-52
pubmed: 1429243
Cell Death Dis. 2014 Jan 16;5:e1001
pubmed: 24434509
mSystems. 2017 Nov 14;2(6):
pubmed: 29152584
Nat Prod Rep. 2012 Oct;29(10):1050-73
pubmed: 22858605
Chemistry. 2017 Nov 13;23(63):15917-15921
pubmed: 28944573
Nat Prod Rep. 2019 Jun 19;36(6):889-918
pubmed: 31139804
Phytochemistry. 2003 Jun;63(4):471-4
pubmed: 12770601
Trends Microbiol. 2018 Oct;26(10):833-840
pubmed: 29801772
Angew Chem Int Ed Engl. 2015 Aug 24;54(35):10145-8
pubmed: 26031409
Org Biomol Chem. 2018 Jan 17;16(3):393-401
pubmed: 29090729
Bioorg Med Chem. 2009 Mar 15;17(6):2304-9
pubmed: 19042133
Angew Chem Int Ed Engl. 2006 Mar 27;45(14):2296-301
pubmed: 16506259
Chirality. 2016 Jun;28(6):453-9
pubmed: 27172768
Int J Syst Evol Microbiol. 2018 Oct;68(10):3101-3110
pubmed: 30113300
Trends Biotechnol. 2019 May;37(5):492-504
pubmed: 30392727
Mar Drugs. 2019 May 30;17(6):
pubmed: 31151260
Chem Biol. 2008 Nov 24;15(11):1231-40
pubmed: 19022183
Genome Res. 2009 Jun;19(6):1117-23
pubmed: 19251739
J Antibiot (Tokyo). 1983 Dec;36(12):1651-8
pubmed: 6420386
Molecules. 2020 Jun 09;25(11):
pubmed: 32527018
J Org Chem. 2006 Jan 6;71(1):117-24
pubmed: 16388626
Chem Biol. 2002 May;9(5):575-83
pubmed: 12031664
Chembiochem. 2008 Dec 15;9(18):2997-3003
pubmed: 19040244
Nucleic Acids Res. 2019 Jul 2;47(W1):W81-W87
pubmed: 31032519