Identification and Expression Analysis of MPK and MKK Gene Families in Pecan (
MKK
MPK
expression
gene family
organ
pecan
Journal
International journal of molecular sciences
ISSN: 1422-0067
Titre abrégé: Int J Mol Sci
Pays: Switzerland
ID NLM: 101092791
Informations de publication
Date de publication:
02 Dec 2022
02 Dec 2022
Historique:
received:
07
11
2022
revised:
21
11
2022
accepted:
29
11
2022
entrez:
11
12
2022
pubmed:
12
12
2022
medline:
15
12
2022
Statut:
epublish
Résumé
Mitogen-activated protein kinases consist of three kinase modules composed of MPKs, MKKs, and MPKKKs. As members of the protein kinase (PK) superfamily, they are involved in various processes, such as developmental programs, cell division, hormonal progression, and signaling responses to biotic and abiotic stresses. In this study, a total of 18 MPKs and 10 MKKs were annotated on the pecan genome, all of which could be classified into four subgroups, respectively. The gene structures and conserved sequences of family members in the same branch were relatively similar. All MPK proteins had a conserved motif TxY, and D(L/I/V)K and VGTxxYMSPER existed in all MKK proteins. Duplication events contributed largely to the expansion of the pecan MPK and MKK gene families. Phylogenetic analysis of protein sequences from six plants indicated that species evolution occurred in pecan. Organ-specific expression profiles of MPK and MKK showed functional diversity.
Identifiants
pubmed: 36499523
pii: ijms232315190
doi: 10.3390/ijms232315190
pmc: PMC9737717
pii:
doi:
Substances chimiques
Mitogen-Activated Protein Kinase Kinases
EC 2.7.12.2
Mitogen-Activated Protein Kinases
EC 2.7.11.24
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Subventions
Organisme : National Key R&D Program Project of China
ID : 2021YFD1000403
Organisme : Central Financial Resources for Forestry Science and Technology Promotion and Demonstration Fund Project of China
ID : Su [2022] TG04
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