Klaus-Peter Koepfli

Affiliations
  • Computer Technologies Laboratory, ITMO University, 49 Kronverkskiy Pr., St. Petersburg 197101, Russian Federation.
  • Smithsonian Conservation Biology Institute, Center for Species Survival, National Zoological Park, 3001 Connecticut Ave., NW Washington, D.C. 20008, USA.

Publications (46)

GADMA: Genetic algorithm for inferring demographic history of multiple populations from allele frequency spectrum data.

GigaScience
Avec: Ekaterina Noskova , Vladimir Ulyantsev , Klaus-Peter Koepfli , Stephen J O'Brien , Pavel Dobrynin

Aquatic Adaptation and Depleted Diversity: A Deep Dive into the Genomes of the Sea Otter and Giant Otter.

Molecular biology and evolution
Avec: Annabel C Beichman , Klaus-Peter Koepfli , Gang Li , William Murphy , Pasha Dobrynin , Sergei Kliver , Martin T Tinker , Michael J Murray , Jeremy Johnson , Kerstin Lindblad-Toh , Elinor K Karlsson , Kirk E Lohmueller , Robert K Wayne

Blue Turns to Gray: Paleogenomic Insights into the Evolutionary History and Extinction of the Blue Antelope (Hippotragus leucophaeus).

Molecular biology and evolution
Avec: Elisabeth Hempel , Faysal Bibi , J Tyler Faith , Klaus-Peter Koepfli , Achim M Klittich , David A Duchêne , James S Brink , Daniela C Kalthoff , Love Dalén , Michael Hofreiter , Michael V Westbury

Vocal learning-associated convergent evolution in mammalian proteins and regulatory elements.

Science (New York, N.Y.)
Avec: Morgan E Wirthlin , Tobias A Schmid , Julie E Elie , Xiaomeng Zhang , Amanda Kowalczyk , Ruby Redlich , Varvara A Shvareva , Ashley Rakuljic , Maria B Ji , Ninad S Bhat , Irene M Kaplow , Daniel E Schäffer , Alyssa J Lawler , Andrew Z Wang , BaDoi N Phan , Siddharth Annaldasula , Ashley R Brown , Tianyu Lu , Byung Kook Lim , Eiman Azim , Auteur inconnu , Nathan L Clark , Wynn K Meyer , Sergei L Kosakovsky Pond , Maria Chikina , Michael M Yartsev , Andreas R Pfenning , Gregory Andrews , Joel C Armstrong , Matteo Bianchi , Bruce W Birren , Kevin R Bredemeyer , Ana M Breit , Matthew J Christmas , Hiram Clawson , Joana Damas , Federica Di Palma , Mark Diekhans , Michael X Dong , Eduardo Eizirik , Kaili Fan , Cornelia Fanter , Nicole M Foley , Karin Forsberg-Nilsson , Carlos J Garcia , John Gatesy , Steven Gazal , Diane P Genereux , Linda Goodman , Jenna Grimshaw , Michaela K Halsey , Andrew J Harris , Glenn Hickey , Michael Hiller , Allyson G Hindle , Robert M Hubley , Graham M Hughes , Jeremy Johnson , David Juan , Irene M Kaplow , Elinor K Karlsson , Kathleen C Keough , Bogdan Kirilenko , Klaus-Peter Koepfli , Jennifer M Korstian , Amanda Kowalczyk , Sergey V Kozyrev , Alyssa J Lawler , Colleen Lawless , Thomas Lehmann , Danielle L Levesque , Harris A Lewin , Xue Li , Abigail Lind , Kerstin Lindblad-Toh , Ava Mackay-Smith , Voichita D Marinescu , Tomas Marques-Bonet , Victor C Mason , Jennifer R S Meadows , Wynn K Meyer , Jill E Moore , Lucas R Moreira , Diana D Moreno-Santillan , Kathleen M Morrill , Gerard Muntané , William J Murphy , Arcadi Navarro , Martin Nweeia , Sylvia Ortmann , Austin Osmanski , Benedict Paten , Nicole S Paulat , Andreas R Pfenning , BaDoi N Phan , Katherine S Pollard , Henry E Pratt , David A Ray , Steven K Reilly , Jeb R Rosen , Irina Ruf , Louise Ryan , Oliver A Ryder , Pardis C Sabeti , Daniel E Schäffer , Aitor Serres , Beth Shapiro , Arian F A Smit , Mark Springer , Chaitanya Srinivasan , Cynthia Steiner , Jessica M Storer , Kevin A M Sullivan , Patrick F Sullivan , Elisabeth Sundström , Megan A Supple , Ross Swofford , Joy-El Talbot , Emma Teeling , Jason Turner-Maier , Alejandro Valenzuela , Franziska Wagner , Ola Wallerman , Chao Wang , Juehan Wang , Zhiping Weng , Aryn P Wilder , Morgan E Wirthlin , James R Xue , Xiaomeng Zhang

The evolutionary history of extinct and living lions.

Proceedings of the National Academy of Sciences of the United States of America
Avec: Marc de Manuel , Ross Barnett , Marcela Sandoval-Velasco , Nobuyuki Yamaguchi , Filipe Garrett Vieira , M Lisandra Zepeda Mendoza , Shiping Liu , Michael D Martin , Mikkel-Holger S Sinding , Sarah S T Mak , Christian Carøe , Shanlin Liu , Chunxue Guo , Jiao Zheng , Grant Zazula , Gennady Baryshnikov , Eduardo Eizirik , Klaus-Peter Koepfli , Warren E Johnson , Agostinho Antunes , Thomas Sicheritz-Ponten , Shyam Gopalakrishnan , Greger Larson , Huanming Yang , Stephen J O'Brien , Anders J Hansen , Guojie Zhang , Tomas Marques-Bonet , M Thomas P Gilbert

Comparative genomics provides new insights into the remarkable adaptations of the African wild dog (Lycaon pictus).

Scientific reports
Avec: Daniel E Chavez , Ilan Gronau , Taylor Hains , Sergei Kliver , Klaus-Peter Koepfli , Robert K Wayne

Breeding Centers, Private Ranches, and Genomics for Creating Sustainable Wildlife Populations.

Bioscience
Avec: David Wildt , Philip Miller , Klaus-Peter Koepfli , Budhan Pukazhenthi , Katy Palfrey , Gavin Livingston , Dan Beetem , Stephen Shurter , Jimmy Gregory , Michael Takács , Kelley Snodgrass

Whole Genome Sequencing and Re-sequencing of the Sable Antelope (

G3 (Bethesda, Md.)
Avec: Klaus-Peter Koepfli , Gaik Tamazian , David Wildt , Pavel Dobrynin , Changhoon Kim , Paul B Frandsen , Raquel Godinho , Andrey A Yurchenko , Aleksey Komissarov , Ksenia Krasheninnikova , Sergei Kliver , Sofia Kolchanova , Margarida Gonçalves , Miguel Carneiro , Pedro Vaz Pinto , Nuno Ferrand , Jesús E Maldonado , Gina M Ferrie , Leona Chemnick , Oliver A Ryder , Warren E Johnson , Pierre Comizzoli , Stephen J O'Brien , Budhan S Pukazhenthi

Whole-genome analysis of giraffe supports four distinct species.

Current biology : CB
Avec: Raphael T F Coimbra , Sven Winter , Vikas Kumar , Klaus-Peter Koepfli , Rebecca M Gooley , Pavel Dobrynin , Julian Fennessy , Axel Janke

Chromosome-Level Genome Assemblies Expand Capabilities of Genomics for Conservation Biology.

Genes
Avec: Azamat Totikov , Andrey Tomarovsky , Dmitry Prokopov , Aliya Yakupova , Tatiana Bulyonkova , Lorena Derezanin , Dmitry Rasskazov , Walter W Wolfsberger , Klaus-Peter Koepfli , Taras K Oleksyk , Sergei Kliver

Darwinian genomics and diversity in the tree of life.

Proceedings of the National Academy of Sciences of the United States of America
Avec: Taylorlyn Stephan , Shawn M Burgess , Hans Cheng , Charles G Danko , Clare A Gill , Erich D Jarvis , Klaus-Peter Koepfli , James E Koltes , Eric Lyons , Pamela Ronald , Oliver A Ryder , Lynn M Schriml , Pamela Soltis , Sue VandeWoude , Huaijun Zhou , Elaine A Ostrander , Elinor K Karlsson

Insights from the rescue and breeding management of Cuvier's gazelle (

Evolutionary applications
Avec: Marina Alvarez-Estape , Claudia Fontsere , Aitor Serres-Armero , Lukas F K Kuderna , Pavel Dobrynin , Héla Guidara , Budhan S Pukazhenthi , Klaus-Peter Koepfli , Tomas Marques-Bonet , Eulalia Moreno , Esther Lizano

Phylogenomics of the world's otters.

Current biology : CB
Avec: Vera de Ferran , Henrique Vieira Figueiró , Fernanda de Jesus Trindade , Oliver Smith , Mikkel-Holger S Sinding , Cristine S Trinca , Gabriele Zenato Lazzari , Géraldine Veron , Juliana A Vianna , Filippo Barbanera , Sergei Kliver , Natalia Serdyukova , Tatiana Bulyonkova , Oliver A Ryder , M Thomas P Gilbert , Klaus-Peter Koepfli , Eduardo Eizirik

First complete mitochondrial genome of the Saharan striped polecat (

Mitochondrial DNA. Part B, Resources
Avec: Autumn Gray , José C Brito , Cody W Edwards , Henrique V Figueiró , Klaus-Peter Koepfli

Conservation management strategy impacts inbreeding and mutation load in scimitar-horned oryx.

Proceedings of the National Academy of Sciences of the United States of America
Avec: Emily Humble , Martin A Stoffel , Kara Dicks , Alex D Ball , Rebecca M Gooley , Justin Chuven , Ricardo Pusey , Mohammed Al Remeithi , Klaus-Peter Koepfli , Budhan Pukazhenthi , Helen Senn , Rob Ogden

Semen proteome and transcriptome of the endangered black-footed ferret (Mustela nigripes) show association with the environment and fertility outcome.

Scientific reports
Avec: Nadya Ali , Olga Amelkina , Rachel M Santymire , Klaus-Peter Koepfli , Pierre Comizzoli , Juan M Vazquez

Epigenetic changes to gene pathways linked to male fertility in ex situ black-footed ferrets.

Evolutionary applications
Avec: Stavi R Tennenbaum , Robyn Bortner , Colleen Lynch , Rachel Santymire , Adrienne Crosier , Jenny Santiestevan , Paul Marinari , Budhan S Pukazhenthi , Pierre Comizzoli , Melissa T R Hawkins , Jesús E Maldonado , Klaus-Peter Koepfli , Bridgett M vonHoldt , Alexandra L DeCandia

Markers of fertility in reproductive microbiomes of male and female endangered black-footed ferrets (Mustela nigripes).

Communications biology
Avec: Sally L Bornbusch , Alexandra Bamford , Piper Thacher , Adrienne Crosier , Paul Marinari , Robyn Bortner , Della Garelle , Travis Livieri , Rachel Santymire , Pierre Comizzoli , Michael Maslanka , Jesús E Maldonado , Klaus-Peter Koepfli , Carly R Muletz-Wolz , Alexandra L DeCandia

A draft genome assembly of spotted hyena, Crocuta crocuta.

Scientific data
Avec: Chentao Yang , Fang Li , Zijun Xiong , Klaus-Peter Koepfli , Oliver Ryder , Polina Perelman , Qiye Li , Guojie Zhang

Comparison of genomic diversity and structure of sable antelope (

Evolutionary applications
Avec: Rebecca M Gooley , Gaik Tamazian , Susette Castañeda-Rico , Katherine R Murphy , Pavel Dobrynin , Gina M Ferrie , Holly Haefele , Jesús E Maldonado , David E Wildt , Budhan S Pukazhenthi , Cody W Edwards , Klaus-Peter Koepfli

Genomic analyses reveal range-wide devastation of sea otter populations.

Molecular ecology
Avec: Annabel C Beichman , Pooneh Kalhori , Christopher C Kyriazis , Amber A DeVries , Sergio Nigenda-Morales , Gisela Heckel , Yolanda Schramm , Andrés Moreno-Estrada , Douglas J Kennett , Mark Hylkema , James Bodkin , Klaus-Peter Koepfli , Kirk E Lohmueller , Robert K Wayne

Molecular Phylogeny and Evolution of Amazon Parrots in the Greater Antilles.

Genes
Avec: Sofiia Kolchanova , Alexey Komissarov , Sergei Kliver , Anyi Mazo-Vargas , Yashira Afanador , Jafet Velez-Valentín , Ricardo Valentín de la Rosa , Stephanie Castro-Marquez , Israel Rivera-Colon , Audrey J Majeske , Walter W Wolfsberger , Taylor Hains , André Corvelo , Juan-Carlos Martinez-Cruzado , Travis C Glenn , Orlando Robinson , Klaus-Peter Koepfli , Taras K Oleksyk

Draft de novo Genome Assembly of the Elusive Jaguarundi, Puma yagouaroundi.

The Journal of heredity
Avec: Gaik Tamazian , Pavel Dobrynin , Anna Zhuk , Daria V Zhernakova , Polina L Perelman , Natalia A Serdyukova , Alexander S Graphodatsky , Aleksey Komissarov , Sergei Kliver , Nikolay Cherkasov , Alan F Scott , David W Mohr , Klaus-Peter Koepfli , Stephen J O'Brien , Ksenia Krasheninnikova

The complete mitochondrial genome of Meller's mongoose (

Mitochondrial DNA. Part B, Resources
Avec: Medhini S Sosale , Melody Roelke-Parker , Gradson A Machange , Cody W Edwards , Henrique V Figueiró , Klaus-Peter Koepfli

Evolution: Genomes reveal the reticulated history of giraffes.

Current biology : CB
Avec: Klaus-Peter Koepfli

Phylogeographic and diversification patterns of the white-nosed coati (Nasua narica): Evidence for south-to-north colonization of North America.

Molecular phylogenetics and evolution
Avec: Sergio F Nigenda-Morales , Matthew E Gompper , David Valenzuela-Galván , Anna R Lay , Karen M Kapheim , Christine Hass , Susan D Booth-Binczik , Gerald A Binczik , Ben T Hirsch , Maureen McColgin , John L Koprowski , Katherine McFadden , Robert K Wayne , Klaus-Peter Koepfli

Chromosomal-level genome assembly of the scimitar-horned oryx: Insights into diversity and demography of a species extinct in the wild.

Molecular ecology resources
Avec: Emily Humble , Pavel Dobrynin , Helen Senn , Justin Chuven , Alan F Scott , David W Mohr , Olga Dudchenko , Arina D Omer , Zane Colaric , Erez Lieberman Aiden , Shaikha Salem Al Dhaheri , David Wildt , Shireen Oliaji , Gaik Tamazian , Budhan Pukazhenthi , Rob Ogden , Klaus-Peter Koepfli

Broad host range of SARS-CoV-2 predicted by comparative and structural analysis of ACE2 in vertebrates.

Proceedings of the National Academy of Sciences of the United States of America
Avec: Joana Damas , Graham M Hughes , Kathleen C Keough , Corrie A Painter , Nicole S Persky , Marco Corbo , Michael Hiller , Klaus-Peter Koepfli , Andreas R Pfenning , Huabin Zhao , Diane P Genereux , Ross Swofford , Katherine S Pollard , Oliver A Ryder , Martin T Nweeia , Kerstin Lindblad-Toh , Emma C Teeling , Elinor K Karlsson , Harris A Lewin

Broad Host Range of SARS-CoV-2 Predicted by Comparative and Structural Analysis of ACE2 in Vertebrates.

bioRxiv : the preprint server for biology
Avec: Joana Damas , Graham M Hughes , Kathleen C Keough , Corrie A Painter , Nicole S Persky , Marco Corbo , Michael Hiller , Klaus-Peter Koepfli , Andreas R Pfenning , Huabin Zhao , Diane P Genereux , Ross Swofford , Katherine S Pollard , Oliver A Ryder , Martin T Nweeia , Kerstin Lindblad-Toh , Emma C Teeling , Elinor K Karlsson , Harris A Lewin

Characteristics of the complete mitochondrial genome of the monotypic genus

PeerJ
Avec: Siuli Mitra , Vaishnavi Kunteepuram , Klaus-Peter Koepfli , Neha Mehra , Wajeeda Tabasum , Ara Sreenivas , Ajay Gaur

Genomic Adaptations and Evolutionary History of the Extinct Scimitar-Toothed Cat, Homotherium latidens.

Current biology : CB
Avec: Ross Barnett , Michael V Westbury , Marcela Sandoval-Velasco , Filipe Garrett Vieira , Sungwon Jeon , Grant Zazula , Michael D Martin , Simon Y W Ho , Niklas Mather , Shyam Gopalakrishnan , Jazmín Ramos-Madrigal , Marc de Manuel , M Lisandra Zepeda-Mendoza , Agostinho Antunes , Aldo Carmona Baez , Binia De Cahsan , Greger Larson , Stephen J O'Brien , Eduardo Eizirik , Warren E Johnson , Klaus-Peter Koepfli , Andreas Wilting , Jörns Fickel , Love Dalén , Eline D Lorenzen , Tomas Marques-Bonet , Anders J Hansen , Guojie Zhang , Jong Bhak , Nobuyuki Yamaguchi , M Thomas P Gilbert

De novo whole-genome assembly and resequencing resources for the roan (Hippotragus equinus), an iconic African antelope.

G3 (Bethesda, Md.)
Avec: Margarida Gonçalves , Hans R Siegismund , Bettine Jansen van Vuuren , Klaus-Peter Koepfli , Nuno Ferrand , Raquel Godinho

Genome Sequencing of a Gray Wolf from Peninsular India Provides New Insights into the Evolution and Hybridization of Gray Wolves.

Genome biology and evolution
Avec: Ming-Shan Wang , Mukesh Thakur , Yadvendradev Jhala , Sheng Wang , Yellapu Srinivas , Shan-Shan Dai , Zheng-Xi Liu , Hong-Man Chen , Richard E Green , Klaus-Peter Koepfli , Beth Shapiro

Multiple types of genomic variation contribute to adaptive traits in the mustelid subfamily Guloninae.

Molecular ecology
Avec: Lorena Derežanin , Asta Blažytė , Pavel Dobrynin , David A Duchêne , José Horacio Grau , Sungwon Jeon , Sergei Kliver , Klaus-Peter Koepfli , Dorina Meneghini , Michaela Preick , Andrey Tomarovsky , Azamat Totikov , Jörns Fickel , Daniel W Förster

Haplotype-resolved assembly of diploid genomes without parental data.

Nature biotechnology
Avec: Haoyu Cheng , Erich D Jarvis , Olivier Fedrigo , Klaus-Peter Koepfli , Lara Urban , Neil J Gemmell , Heng Li

Evolutionary constraint and innovation across hundreds of placental mammals.

Science (New York, N.Y.)
Avec: Matthew J Christmas , Irene M Kaplow , Diane P Genereux , Michael X Dong , Graham M Hughes , Xue Li , Patrick F Sullivan , Allyson G Hindle , Gregory Andrews , Joel C Armstrong , Matteo Bianchi , Ana M Breit , Mark Diekhans , Cornelia Fanter , Nicole M Foley , Daniel B Goodman , Linda Goodman , Kathleen C Keough , Bogdan Kirilenko , Amanda Kowalczyk , Colleen Lawless , Abigail L Lind , Jennifer R S Meadows , Lucas R Moreira , Ruby W Redlich , Louise Ryan , Ross Swofford , Alejandro Valenzuela , Franziska Wagner , Ola Wallerman , Ashley R Brown , Joana Damas , Kaili Fan , John Gatesy , Jenna Grimshaw , Jeremy Johnson , Sergey V Kozyrev , Alyssa J Lawler , Voichita D Marinescu , Kathleen M Morrill , Austin Osmanski , Nicole S Paulat , BaDoi N Phan , Steven K Reilly , Daniel E Schäffer , Cynthia Steiner , Megan A Supple , Aryn P Wilder , Morgan E Wirthlin , James R Xue , Auteur inconnu , Bruce W Birren , Steven Gazal , Robert M Hubley , Klaus-Peter Koepfli , Tomas Marques-Bonet , Wynn K Meyer , Martin Nweeia , Pardis C Sabeti , Beth Shapiro , Arian F A Smit , Mark S Springer , Emma C Teeling , Zhiping Weng , Michael Hiller , Danielle L Levesque , Harris A Lewin , William J Murphy , Arcadi Navarro , Benedict Paten , Katherine S Pollard , David A Ray , Irina Ruf , Oliver A Ryder , Andreas R Pfenning , Kerstin Lindblad-Toh , Elinor K Karlsson

Comparative genomics uncovers the evolutionary history, demography, and molecular adaptations of South American canids.

Proceedings of the National Academy of Sciences of the United States of America
Avec: Daniel E Chavez , Ilan Gronau , Taylor Hains , Rebecca B Dikow , Paul B Frandsen , Henrique V Figueiró , Fabrício S Garcez , Ligia Tchaicka , Rogério C de Paula , Flávio H G Rodrigues , Rodrigo S P Jorge , Edson S Lima , Nucharin Songsasen , Warren E Johnson , Eduardo Eizirik , Klaus-Peter Koepfli , Robert K Wayne

Chromosome-length genome assembly and karyotype of the endangered black-footed ferret (Mustela nigripes).

The Journal of heredity
Avec: Sergei Kliver , Marlys L Houck , Polina L Perelman , Azamat Totikov , Andrey Tomarovsky , Olga Dudchenko , Arina D Omer , Zane Colaric , David Weisz , Erez Lieberman Aiden , Saki Chan , Alex Hastie , Aleksey Komissarov , Oliver A Ryder , Alexander Graphodatsky , Warren E Johnson , Jesús E Maldonado , Budhan S Pukazhenthi , Paul E Marinari , David E Wildt , Klaus-Peter Koepfli

Gut bacterial composition shows sex-specific shifts during breeding season in ex situ managed black-footed ferrets.

The Journal of heredity
Avec: Alexandra L DeCandia , Laura Adeduro , Piper Thacher , Adrienne Crosier , Paul Marinari , Robyn Bortner , Della Garelle , Travis Livieri , Rachel Santymire , Pierre Comizzoli , Michael Maslanka , Jesús E Maldonado , Klaus-Peter Koepfli , Carly Muletz-Wolz , Sally L Bornbusch

Comparative genomics and genome-wide SNPs of endangered Eld's deer provide breeder selection for inbreeding avoidance.

Scientific reports
Avec: Vichayanee Pumpitakkul , Wanna Chetruengchai , Chalurmpon Srichomthong , Chureerat Phokaew , Wirulda Pootakham , Chutima Sonthirod , Wanapinun Nawae , Sissades Tongsima , Pongsakorn Wangkumhang , Alisa Wilantho , Yongchai Utara , Ampika Thongpakdee , Saowaphang Sanannu , Umaporn Maikaew , Suphattharaphonnaphan Khuntawee , Wirongrong Changpetch , Phairot Phromwat , Kacharin Raschasin , Phunyaphat Sarnkhaeveerakul , Pannawat Supapannachart , Wannapol Buthasane , Budhan S Pukazhenthi , Klaus-Peter Koepfli , Prapat Suriyaphol , Sithichoke Tangphatsornruang , Gunnaporn Suriyaphol , Vorasuk Shotelersuk

Genomics Reveals Complex Population History and Unexpected Diversity of Eurasian Otters (Lutra lutra) in Britain Relative to Genetic Methods.

Molecular biology and evolution
Avec: Sarah J du Plessis , Mark Blaxter , Klaus-Peter Koepfli , Elizabeth A Chadwick , Frank Hailer

Mitogenomic Insights into the Evolution, Divergence Time, and Ancestral Ranges of

Genes
Avec: Prateek Dey , Swapna Devi Ray , Venkata Hanumat Sastry Kochiganti , Budhan S Pukazhenthi , Klaus-Peter Koepfli , Ram Pratap Singh

Towards complete and error-free genome assemblies of all vertebrate species.

Nature
Avec: Arang Rhie , Shane A McCarthy , Olivier Fedrigo , Joana Damas , Giulio Formenti , Sergey Koren , Marcela Uliano-Silva , William Chow , Arkarachai Fungtammasan , Juwan Kim , Chul Lee , Byung June Ko , Mark Chaisson , Gregory L Gedman , Lindsey J Cantin , Francoise Thibaud-Nissen , Leanne Haggerty , Iliana Bista , Michelle Smith , Bettina Haase , Jacquelyn Mountcastle , Sylke Winkler , Sadye Paez , Jason Howard , Sonja C Vernes , Tanya M Lama , Frank Grutzner , Wesley C Warren , Christopher N Balakrishnan , Dave Burt , Julia M George , Matthew T Biegler , David Iorns , Andrew Digby , Daryl Eason , Bruce Robertson , Taylor Edwards , Mark Wilkinson , George Turner , Axel Meyer , Andreas F Kautt , Paolo Franchini , H William Detrich , Hannes Svardal , Maximilian Wagner , Gavin J P Naylor , Martin Pippel , Milan Malinsky , Mark Mooney , Maria Simbirsky , Brett T Hannigan , Trevor Pesout , Marlys Houck , Ann Misuraca , Sarah B Kingan , Richard Hall , Zev Kronenberg , Ivan Sović , Christopher Dunn , Zemin Ning , Alex Hastie , Joyce Lee , Siddarth Selvaraj , Richard E Green , Nicholas H Putnam , Ivo Gut , Jay Ghurye , Erik Garrison , Ying Sims , Joanna Collins , Sarah Pelan , James Torrance , Alan Tracey , Jonathan Wood , Robel E Dagnew , Dengfeng Guan , Sarah E London , David F Clayton , Claudio V Mello , Samantha R Friedrich , Peter V Lovell , Ekaterina Osipova , Farooq O Al-Ajli , Simona Secomandi , Heebal Kim , Constantina Theofanopoulou , Michael Hiller , Yang Zhou , Robert S Harris , Kateryna D Makova , Paul Medvedev , Jinna Hoffman , Patrick Masterson , Karen Clark , Fergal Martin , Kevin Howe , Paul Flicek , Brian P Walenz , Woori Kwak , Hiram Clawson , Mark Diekhans , Luis Nassar , Benedict Paten , Robert H S Kraus , Andrew J Crawford , M Thomas P Gilbert , Guojie Zhang , Byrappa Venkatesh , Robert W Murphy , Klaus-Peter Koepfli , Beth Shapiro , Warren E Johnson , Federica Di Palma , Tomas Marques-Bonet , Emma C Teeling , Tandy Warnow , Jennifer Marshall Graves , Oliver A Ryder , David Haussler , Stephen J O'Brien , Jonas Korlach , Harris A Lewin , Kerstin Howe , Eugene W Myers , Richard Durbin , Adam M Phillippy , Erich D Jarvis

Whole-Genome Sequencing of Procyonids Reveals Distinct Demographic Histories in Kinkajou (Potos flavus) and Northern Raccoon (Procyon lotor).

Genome biology and evolution
Avec: Mirian T N Tsuchiya , Rebecca B Dikow , Klaus-Peter Koepfli , Paul B Frandsen , Larry L Rockwood , Jesús E Maldonado

Diversity and Paleodemography of the Addax (

Genes
Avec: Elisabeth Hempel , Michael V Westbury , José H Grau , Alexandra Trinks , Johanna L A Paijmans , Sergei Kliver , Axel Barlow , Frieder Mayer , Johannes Müller , Lei Chen , Klaus-Peter Koepfli , Michael Hofreiter , Faysal Bibi

Expanding the conservation genomics toolbox: Incorporating structural variants to enhance genomic studies for species of conservation concern.

Molecular ecology
Avec: Jana Wold , Klaus-Peter Koepfli , Stephanie J Galla , David Eccles , Carolyn J Hogg , Marissa F Le Lec , Joseph Guhlin , Anna W Santure , Tammy E Steeves

Réseau de co-auteurs

Sergei Kliver 10 collaborations
Oliver A Ryder 9 collaborations
Pavel Dobrynin 8 collaborations
Jesús E Maldonado 7 collaborations
Budhan S Pukazhenthi 7 collaborations
Stephen J O'Brien 6 collaborations
Elinor K Karlsson 6 collaborations
Tomas Marques-Bonet 6 collaborations
Warren E Johnson 6 collaborations
Kerstin Lindblad-Toh 5 collaborations
Robert K Wayne 5 collaborations
Andreas R Pfenning 5 collaborations
Joana Damas 5 collaborations
Eduardo Eizirik 5 collaborations
Michael Hiller 5 collaborations
Harris A Lewin 5 collaborations
Pierre Comizzoli 5 collaborations
Diane P Genereux 4 collaborations
Graham M Hughes 4 collaborations
Kathleen C Keough 4 collaborations
Katherine S Pollard 4 collaborations
Beth Shapiro 4 collaborations
Ross Swofford 4 collaborations
Guojie Zhang 4 collaborations
M Thomas P Gilbert 4 collaborations
Gaik Tamazian 4 collaborations
Emma C Teeling 4 collaborations
Jeremy Johnson 3 collaborations
Michael V Westbury 3 collaborations
Morgan E Wirthlin 3 collaborations
Amanda Kowalczyk 3 collaborations
Irene M Kaplow 3 collaborations
Daniel E Schäffer 3 collaborations
Alyssa J Lawler 3 collaborations
BaDoi N Phan 3 collaborations
Wynn K Meyer 3 collaborations
Mark Diekhans 3 collaborations
Benedict Paten 3 collaborations
Taylor Hains 3 collaborations
David Wildt 3 collaborations
Budhan Pukazhenthi 3 collaborations
Paul B Frandsen 3 collaborations
Aleksey Komissarov 3 collaborations
Rebecca M Gooley 3 collaborations
Azamat Totikov 3 collaborations
Andrey Tomarovsky 3 collaborations
Erich D Jarvis 3 collaborations
Cody W Edwards 3 collaborations
Henrique V Figueiró 3 collaborations
Robyn Bortner 3 collaborations
Rachel Santymire 3 collaborations
Adrienne Crosier 3 collaborations
Paul Marinari 3 collaborations
Alexandra L DeCandia 3 collaborations
Annabel C Beichman 2 collaborations
Kirk E Lohmueller 2 collaborations
Elisabeth Hempel 2 collaborations
Faysal Bibi 2 collaborations
David A Duchêne 2 collaborations
Love Dalén 2 collaborations
Michael Hofreiter 2 collaborations
Xiaomeng Zhang 2 collaborations
Ashley R Brown 2 collaborations
None None 2 collaborations
Gregory Andrews 2 collaborations
Joel C Armstrong 2 collaborations
Matteo Bianchi 2 collaborations
Bruce W Birren 2 collaborations
Ana M Breit 2 collaborations
Matthew J Christmas 2 collaborations
Hiram Clawson 2 collaborations
Federica Di Palma 2 collaborations
Michael X Dong 2 collaborations
Kaili Fan 2 collaborations
Cornelia Fanter 2 collaborations
Nicole M Foley 2 collaborations
John Gatesy 2 collaborations
Steven Gazal 2 collaborations
Linda Goodman 2 collaborations
Jenna Grimshaw 2 collaborations
Allyson G Hindle 2 collaborations
Robert M Hubley 2 collaborations
Bogdan Kirilenko 2 collaborations
Sergey V Kozyrev 2 collaborations
Colleen Lawless 2 collaborations
Danielle L Levesque 2 collaborations
Xue Li 2 collaborations
Voichita D Marinescu 2 collaborations
Jennifer R S Meadows 2 collaborations
Lucas R Moreira 2 collaborations
Kathleen M Morrill 2 collaborations
William J Murphy 2 collaborations
Arcadi Navarro 2 collaborations
Martin Nweeia 2 collaborations
Austin Osmanski 2 collaborations
Nicole S Paulat 2 collaborations
David A Ray 2 collaborations
Steven K Reilly 2 collaborations
Irina Ruf 2 collaborations
Louise Ryan 2 collaborations
Pardis C Sabeti 2 collaborations
Arian F A Smit 2 collaborations
Cynthia Steiner 2 collaborations
Patrick F Sullivan 2 collaborations
Megan A Supple 2 collaborations
Alejandro Valenzuela 2 collaborations
Franziska Wagner 2 collaborations
Ola Wallerman 2 collaborations
Zhiping Weng 2 collaborations
Aryn P Wilder 2 collaborations
James R Xue 2 collaborations
Marc de Manuel 2 collaborations
Ross Barnett 2 collaborations
Marcela Sandoval-Velasco 2 collaborations
Nobuyuki Yamaguchi 2 collaborations
Filipe Garrett Vieira 2 collaborations
Michael D Martin 2 collaborations
Mikkel-Holger S Sinding 2 collaborations
Grant Zazula 2 collaborations
Agostinho Antunes 2 collaborations
Shyam Gopalakrishnan 2 collaborations
Greger Larson 2 collaborations
Anders J Hansen 2 collaborations
Daniel E Chavez 2 collaborations
Ilan Gronau 2 collaborations
Raquel Godinho 2 collaborations
Ksenia Krasheninnikova 2 collaborations
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Nuno Ferrand 2 collaborations
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Chul Lee 1 collaboration
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Dave Burt 1 collaboration
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Taylor Edwards 1 collaboration
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Martin Pippel 1 collaboration
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Sarah E London 1 collaboration
David F Clayton 1 collaboration
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Yang Zhou 1 collaboration
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