S Brul

Affiliations

Department of Molecular Biology and Microbial Food Safety, Swammerdam Institute for Life Sciences, University of Amsterdam, Science Park 904, 1098 XH Amsterdam, The Netherlands. Electronic address: s.brul@uva.nl.

Publications (45)

Bacterial Persister-Cells and Spores in the Food Chain: Their Potential Inactivation by Antimicrobial Peptides (AMPs).

International journal of molecular sciences

Avec: Shiqi Liu , Stanley Brul , Sebastian A J Zaat

Identification of Native Cross-Links in

Journal of proteome research

Avec: Rick Ursem , Bhagyashree Swarge , Wishwas R Abhyankar , Hansuk Buncherd , Leo J de Koning , Peter Setlow , Stanley Brul , Gertjan Kramer

Identification and characterization of new proteins crucial for bacterial spore resistance and germination.

Frontiers in microbiology

Avec: Benjamin Yu , Julia Kanaan , Hannah Shames , James Wicander , Makunda Aryal , Yunfeng Li , George Korza , Stanley Brul , Gertjan Kramer , Yong-Qing Li , Frank C Nichols , Bing Hao , Peter Setlow

Expression of the 2Duf protein in wild-type Bacillus subtilis spores stabilizes inner membrane proteins and increases spore resistance to wet heat and hydrogen peroxide.

Journal of applied microbiology

Avec: George Korza , Sarah DePratti , Daniel Fairchild , James Wicander , Julia Kanaan , Hannah Shames , Frank C Nichols , Ann Cowan , Stanley Brul , Peter Setlow

Proteomics and microscopy tools for the study of antimicrobial resistance and germination mechanisms of bacterial spores.

Food microbiology

Avec: W R Abhyankar , J Wen , B N Swarge , Z Tu , R de Boer , J P P M Smelt , L J de Koning , E Manders , C G de Koster , S Brul

Heat Activation and Inactivation of Bacterial Spores: Is There an Overlap?

Applied and environmental microbiology

Avec: Juan Wen , Jan P P M Smelt , Norbert O E Vischer , Arend L de Vos , Peter Setlow , Stanley Brul

Molecular Physiological Characterization of a High Heat Resistant Spore Forming

Microorganisms

Avec: Zhiwei Tu , Peter Setlow , Stanley Brul , Gertjan Kramer

Identification of ebselen and its analogues as potent covalent inhibitors of papain-like protease from SARS-CoV-2.

Scientific reports

Avec: Ewelina Weglarz-Tomczak , Jakub M Tomczak , Michał Talma , Małgorzata Burda-Grabowska , Mirosław Giurg , Stanley Brul

GEM-Based Metabolic Profiling for Human Bone Osteosarcoma under Different Glucose and Glutamine Availability.

International journal of molecular sciences

Avec: Ewelina Weglarz-Tomczak , Demi J Rijlaarsdam , Jakub M Tomczak , Stanley Brul

Isolation and characterization of persisters of the pathogenic microorganism

iScience

Avec: Shiqi Liu , Paul Laman , Sean Jensen , Nicole N van der Wel , Gertjan Kramer , Sebastian A J Zaat , Stanley Brul

Investigating Synthesis of the MalS Malic Enzyme during Bacillus subtilis Spore Germination and Outgrowth and the Influence of Spore Maturation and Sporulation Conditions.

mSphere

Avec: Bhagyashree Swarge , Chahida Nafid , Norbert Vischer , Gertjan Kramer , Peter Setlow , Stanley Brul

A live-cell super-resolution technique demonstrated by imaging germinosomes in wild-type bacterial spores.

Scientific reports

Avec: R M P Breedijk , J Wen , V Krishnaswami , T Bernas , E M M Manders , P Setlow , N O E Vischer , S Brul

Effects of a previously selected antibiotic resistance on mutations acquired during development of a second resistance in Escherichia coli.

BMC genomics

Avec: Marloes Hoeksema , Martijs J Jonker , Stanley Brul , Benno H Ter Kuile

Antibiotic resistance plasmid composition and architecture in Escherichia coli isolates from meat.

Scientific reports

Avec: Tania S Darphorn , Keshia Bel , Belinda B Koenders-van Sint Anneland , Stanley Brul , Benno H Ter Kuile

Isolation of Persister Cells of

International journal of molecular sciences

Avec: Shiqi Liu , Stanley Brul , Sebastian A J Zaat

Visualization of SpoVAEa Protein Dynamics in Dormant Spores of

Microbiology spectrum

Avec: Yan Wang , Norbert O E Vischer , Demi Wekking , Alessandra Boggian , Peter Setlow , Stanley Brul

The Role of the Gut Microbiota in the Effects of Early-Life Stress and Dietary Fatty Acids on Later-Life Central and Metabolic Outcomes in Mice.

mSystems

Avec: Kitty Reemst , Sebastian Tims , Kit-Yi Yam , Mona Mischke , Jan Knol , Stanley Brul , Lidewij Schipper , Aniko Korosi

Integrative Metabolomics and Proteomics Allow the Global Intracellular Characterization of

Journal of proteome research

Avec: Yixuan Huang , Bhagyashree N Swarge , Winfried Roseboom , Jurre D Bleeker , Stanley Brul , Peter Setlow , Gertjan Kramer

Role of RelA-synthesized (p)ppGpp and ROS-induced mutagenesis in

iScience

Avec: Wenxi Qi , Martijs J Jonker , Wim de Leeuw , Stanley Brul , Benno H Ter Kuile

Extreme Low Cytosolic pH Is a Signal for Cell Survival in Acid Stressed Yeast.

Genes

Avec: Rodrigo Mendonça Lucena , Laura Dolz-Edo , Stanley Brul , Marcos Antonio de Morais , Gertien Smits

Caloric restriction controls stationary phase survival through Protein Kinase A (PKA) and cytosolic pH.

Aging cell

Avec: Laura Dolz-Edo , Margaretha van der Deen , Stanley Brul , Gertien Jacoba Smits

Dynamics of Germinosome Formation and FRET-Based Analysis of Interactions between GerD and Germinant Receptor Subunits in

International journal of molecular sciences

Avec: Yan Wang , Ronald M P Breedijk , Mark A Hink , Lars Bults , Norbert O E Vischer , Peter Setlow , Stanley Brul

The Membrane Proteome of Spores and Vegetative Cells of the Food-Borne Pathogen

International journal of molecular sciences

Avec: Xiaowei Gao , Bhagyashree N Swarge , Henk L Dekker , Winfried Roseboom , Stanley Brul , Gertjan Kramer

M2R: a Python add-on to cobrapy for modifying human genome-scale metabolic reconstruction using the gut microbiota models.

Bioinformatics (Oxford, England)

Avec: Ewelina Weglarz-Tomczak , Jakub M Tomczak , Stanley Brul

Genetic editing of multi-resistance plasmids in Escherichia coli isolated from meat during transfer.

Plasmid

Avec: Tania S Darphorn , Stanley Brul , Benno H Ter Kuile

Mechanisms and Applications of Bacterial Sporulation and Germination in the Intestine.

International journal of molecular sciences

Avec: Nienke Koopman , Lauren Remijas , Jurgen Seppen , Peter Setlow , Stanley Brul

History of fecal transplantation; camel feces contains limited amounts of Bacillus subtilis spores and likely has no traditional role in the treatment of dysentery.

PloS one

Avec: Nienke Koopman , Pim van Leeuwen , Stanley Brul , Jurgen Seppen

Model-driven approach for the production of butyrate from CO

Frontiers in microbiology

Avec: Sara Benito-Vaquerizo , Niels Nouse , Peter J Schaap , Jeroen Hugenholtz , Stanley Brul , Ana M López-Contreras , Vitor A P Martins Dos Santos , Maria Suarez-Diez

Mechanistic insights into the adaptive evolvability of spore heat resistance in Bacillus cereus sensu lato.

International journal of food microbiology

Avec: Sadhana Khanal , Tom Dongmin Kim , Katrien Begyn , Wouter Duverger , Gertjan Kramer , Stanley Brul , Andreja Rajkovic , Frank Devlieghere , Marc Heyndrickx , Joost Schymkowitz , Frederic Rousseau , Véronique Broussolle , Chris Michiels , Abram Aertsen

Germination and outgrowth of Bacillus mycoides KBAB4 spores are impacted by environmental pH, quantitatively analyzed at single cell level with sporetracker.

Food microbiology

Avec: C Trunet , N Vischer , L Coroller , S Brul

A customizable and defined medium supporting culturing of

Applied and environmental microbiology

Avec: Raymond Pasman , Jianbo Zhang , Sebastian A J Zaat , Stanley Brul , Bastiaan P Krom

Visualization of Germinosomes and the Inner Membrane in Bacillus subtilis Spores.

Journal of visualized experiments : JoVE

Avec: Juan Wen , Raymond Pasman , Erik M M Manders , Peter Setlow , Stanley Brul

Artificial Sporulation Induction (ASI) by

International journal of molecular sciences

Avec: Zhiwei Tu , Wishwas R Abhyankar , Bhagyashree N Swarge , Nicole van der Wel , Gertjan Kramer , Stanley Brul , Leo J de Koning

Multiplication of

International journal of molecular sciences

Avec: Tania S Darphorn , Yuanqing Hu , Belinda B Koenders-van Sintanneland , Stanley Brul , Benno H Ter Kuile

The Multifaceted Role of Serotonin in Intestinal Homeostasis.

International journal of molecular sciences

Avec: Nienke Koopman , Drosos Katsavelis , Anne S Ten Hove , Stanley Brul , Wouter J de Jonge , Jurgen Seppen

Low socioeconomic status is associated with worse treatment outcomes in patients with Achilles tendinopathy.

British journal of sports medicine

Avec: Tjerk Sleeswijk Visser , Stefano Brul , Jie Deng , Joshua Bonsel , Eline van Es , Denise Eygendaal , Robert-Jan de Vos

Transfer dynamics of multi-resistance plasmids in Escherichia coli isolated from meat.

PloS one

Avec: Tania S Darphorn , Belinda B Koenders-van Sintanneland , Anita E Grootemaat , Nicole N van der Wel , Stanley Brul , Benno H Ter Kuile

Organization and dynamics of the SpoVAEa protein and its surrounding inner membrane lipids, upon germination of Bacillus subtilis spores.

Scientific reports

Avec: Juan Wen , Norbert O E Vischer , Arend L de Vos , Erik M M Manders , Peter Setlow , Stanley Brul

Are neuromodulation interventions associated with changes in the gut microbiota? A systematic review.

Neuropharmacology

Avec: Vera Korenblik , Marlies E Brouwer , Aniko Korosi , Damiaan Denys , Claudi L H Bockting , Stanley Brul , Anja Lok

Changes in the Spore Proteome of

Microorganisms

Avec: Xiaowei Gao , Bhagyashree N Swarge , Winfried Roseboom , Yan Wang , Henk L Dekker , Peter Setlow , Stanley Brul , Gertjan Kramer

Genomic versus Plasmid-Borne Expression of Germinant Receptor Proteins in Bacillus cereus Strain 14579

Microorganisms

Avec: Yan Wang , Peter Setlow , Stanley Brul

Synthetic microbial communities (SynComs) of the human gut: design, assembly, and applications.

FEMS microbiology reviews

Avec: Pim T van Leeuwen , Stanley Brul , Jianbo Zhang , Meike T Wortel

Exploring the potential of Bacillus subtilis as cell factory for food ingredients and special chemicals.

Microbial cell factories

Avec: Taichi Chen , Stanley Brul , Jeroen Hugenholtz

Molecular physiological characterization of the dynamics of persister formation in

Antimicrobial agents and chemotherapy

Avec: Shiqi Liu , Yixuan Huang , Sean Jensen , Paul Laman , Gertjan Kramer , Sebastian A J Zaat , Stanley Brul

Reactive oxygen species accelerate

iScience

Avec: Wenxi Qi , Martijs J Jonker , Wim de Leeuw , Stanley Brul , Benno H Ter Kuile

Réseau de co-auteurs

Stanley Brul 41 collaborations

Peter Setlow 14 collaborations

Gertjan Kramer 11 collaborations

Benno H Ter Kuile 7 collaborations

Sebastian A J Zaat 5 collaborations

Shiqi Liu 4 collaborations

Norbert O E Vischer 4 collaborations

Tania S Darphorn 4 collaborations

Yan Wang 4 collaborations

Bhagyashree N Swarge 4 collaborations

Juan Wen 3 collaborations

Ewelina Weglarz-Tomczak 3 collaborations

Jakub M Tomczak 3 collaborations

Martijs J Jonker 3 collaborations

Winfried Roseboom 3 collaborations

Nienke Koopman 3 collaborations

Jurgen Seppen 3 collaborations

Bhagyashree Swarge 2 collaborations

Wishwas R Abhyankar 2 collaborations

Leo J de Koning 2 collaborations

Julia Kanaan 2 collaborations

Hannah Shames 2 collaborations

James Wicander 2 collaborations

George Korza 2 collaborations

Frank C Nichols 2 collaborations

J Wen 2 collaborations

Arend L de Vos 2 collaborations

Zhiwei Tu 2 collaborations

Paul Laman 2 collaborations

Sean Jensen 2 collaborations

Nicole N van der Wel 2 collaborations

Aniko Korosi 2 collaborations

Yixuan Huang 2 collaborations

Wenxi Qi 2 collaborations

Wim de Leeuw 2 collaborations

Laura Dolz-Edo 2 collaborations

Xiaowei Gao 2 collaborations

Henk L Dekker 2 collaborations

Jeroen Hugenholtz 2 collaborations

Raymond Pasman 2 collaborations

Jianbo Zhang 2 collaborations

Erik M M Manders 2 collaborations

Belinda B Koenders-van Sintanneland 2 collaborations

Rick Ursem 1 collaboration

Hansuk Buncherd 1 collaboration

Benjamin Yu 1 collaboration

Makunda Aryal 1 collaboration

Yunfeng Li 1 collaboration

Yong-Qing Li 1 collaboration

Bing Hao 1 collaboration

Sarah DePratti 1 collaboration

Daniel Fairchild 1 collaboration

Ann Cowan 1 collaboration

W R Abhyankar 1 collaboration

B N Swarge 1 collaboration

Z Tu 1 collaboration

R de Boer 1 collaboration

J P P M Smelt 1 collaboration

L J de Koning 1 collaboration

E Manders 1 collaboration

C G de Koster 1 collaboration

Jan P P M Smelt 1 collaboration

Michał Talma 1 collaboration

Małgorzata Burda-Grabowska 1 collaboration

Mirosław Giurg 1 collaboration

Demi J Rijlaarsdam 1 collaboration

Chahida Nafid 1 collaboration

Norbert Vischer 1 collaboration

R M P Breedijk 1 collaboration

V Krishnaswami 1 collaboration

T Bernas 1 collaboration

E M M Manders 1 collaboration

P Setlow 1 collaboration

N O E Vischer 1 collaboration

Marloes Hoeksema 1 collaboration

Keshia Bel 1 collaboration

Belinda B Koenders-van Sint Anneland 1 collaboration

Demi Wekking 1 collaboration

Alessandra Boggian 1 collaboration

Kitty Reemst 1 collaboration

Sebastian Tims 1 collaboration

Kit-Yi Yam 1 collaboration

Mona Mischke 1 collaboration

Jan Knol 1 collaboration

Lidewij Schipper 1 collaboration

Jurre D Bleeker 1 collaboration

Rodrigo Mendonça Lucena 1 collaboration

Marcos Antonio de Morais 1 collaboration

Gertien Smits 1 collaboration

Margaretha van der Deen 1 collaboration

Gertien Jacoba Smits 1 collaboration

Ronald M P Breedijk 1 collaboration

Mark A Hink 1 collaboration

Lars Bults 1 collaboration

Lauren Remijas 1 collaboration

Pim van Leeuwen 1 collaboration

Sara Benito-Vaquerizo 1 collaboration

Niels Nouse 1 collaboration

Peter J Schaap 1 collaboration

Ana M López-Contreras 1 collaboration

Vitor A P Martins Dos Santos 1 collaboration

Maria Suarez-Diez 1 collaboration

Sadhana Khanal 1 collaboration

Tom Dongmin Kim 1 collaboration

Katrien Begyn 1 collaboration

Wouter Duverger 1 collaboration

Andreja Rajkovic 1 collaboration

Frank Devlieghere 1 collaboration

Marc Heyndrickx 1 collaboration

Joost Schymkowitz 1 collaboration

Frederic Rousseau 1 collaboration

Véronique Broussolle 1 collaboration

Chris Michiels 1 collaboration

Abram Aertsen 1 collaboration

C Trunet 1 collaboration

N Vischer 1 collaboration

L Coroller 1 collaboration

Bastiaan P Krom 1 collaboration

Nicole van der Wel 1 collaboration

Yuanqing Hu 1 collaboration

Drosos Katsavelis 1 collaboration

Anne S Ten Hove 1 collaboration

Wouter J de Jonge 1 collaboration

Tjerk Sleeswijk Visser 1 collaboration

Stefano Brul 1 collaboration

Jie Deng 1 collaboration

Joshua Bonsel 1 collaboration

Eline van Es 1 collaboration

Denise Eygendaal 1 collaboration

Robert-Jan de Vos 1 collaboration

Anita E Grootemaat 1 collaboration

Vera Korenblik 1 collaboration

Marlies E Brouwer 1 collaboration

Damiaan Denys 1 collaboration

Claudi L H Bockting 1 collaboration

Anja Lok 1 collaboration

Pim T van Leeuwen 1 collaboration

Meike T Wortel 1 collaboration

Taichi Chen 1 collaboration