Sara Santagata

Affiliations
  • Microenvironment Molecular Targets, Istituto Nazionale Tumori - IRCCS - Fondazione G. Pascale, Napoli, Italy.

Publications (63)

HSF1 phase transition mediates stress adaptation and cell fate decisions.

Nature cell biology
Avec: Giorgio Gaglia , Rumana Rashid , Clarence Yapp , Gaurav N Joshi , Carmen G Li , Susan L Lindquist , Kristopher A Sarosiek , Luke Whitesell , Peter K Sorger , Sandro Santagata

Neuronal differentiation and cell-cycle programs mediate response to BET-bromodomain inhibition in MYC-driven medulloblastoma.

Nature communications
Avec: Pratiti Bandopadhayay , Federica Piccioni , Ryan O'Rourke , Patricia Ho , Elizabeth M Gonzalez , Graham Buchan , Kenin Qian , Gabrielle Gionet , Emily Girard , Margo Coxon , Matthew G Rees , Lisa Brenan , Frank Dubois , Ofer Shapira , Noah F Greenwald , Melanie Pages , Amanda Balboni Iniguez , Brenton R Paolella , Alice Meng , Claire Sinai , Giovanni Roti , Neekesh V Dharia , Amanda Creech , Benjamin Tanenbaum , Prasidda Khadka , Adam Tracy , Hong L Tiv , Andrew L Hong , Shannon Coy , Rumana Rashid , Jia-Ren Lin , Glenn S Cowley , Fred C Lam , Amy Goodale , Yenarae Lee , Kathleen Schoolcraft , Francisca Vazquez , William C Hahn , Aviad Tsherniak , James E Bradner , Michael B Yaffe , Till Milde , Stefan M Pfister , Jun Qi , Monica Schenone , Steven A Carr , Keith L Ligon , Mark W Kieran , Sandro Santagata , James M Olson , Prafulla C Gokhale , Jacob D Jaffe , David E Root , Kimberly Stegmaier , Cory M Johannessen , Rameen Beroukhim

An update on the CNS manifestations of neurofibromatosis type 2.

Acta neuropathologica
Avec: Shannon Coy , Rumana Rashid , Anat Stemmer-Rachamimov , Sandro Santagata

Scope2Screen: Focus+Context Techniques for Pathology Tumor Assessment in Multivariate Image Data.

IEEE transactions on visualization and computer graphics
Avec: Jared Jessup , Robert Krueger , Simon Warchol , John Hoffer , Jeremy Muhlich , Cecily C Ritch , Giorgio Gaglia , Shannon Coy , Yu-An Chen , Jia-Ren Lin , Sandro Santagata , Peter K Sorger , Hanspeter Pfister

Narrative online guides for the interpretation of digital-pathology images and tissue-atlas data.

Nature biomedical engineering
Avec: Rumana Rashid , Yu-An Chen , John Hoffer , Jeremy L Muhlich , Jia-Ren Lin , Robert Krueger , Hanspeter Pfister , Richard Mitchell , Sandro Santagata , Peter K Sorger

HAND1 and BARX1 Act as Transcriptional and Anatomic Determinants of Malignancy in Gastrointestinal Stromal Tumor.

Clinical cancer research : an official journal of the American Association for Cancer Research
Avec: Matthew L Hemming , Shannon Coy , Jia-Ren Lin , Jessica L Andersen , Joanna Przybyl , Emanuele Mazzola , Amr H Abdelhamid Ahmed , Matt van de Rijn , Peter K Sorger , Scott A Armstrong , George D Demetri , Sandro Santagata

Identification and Therapeutic Targeting of GPR20, Selectively Expressed in Gastrointestinal Stromal Tumors, with DS-6157a, a First-in-Class Antibody-Drug Conjugate.

Cancer discovery
Avec: Kenji Iida , Amr H Abdelhamid Ahmed , Akiko Kawano Nagatsuma , Tomoko Shibutani , Satoru Yasuda , Michiko Kitamura , Chiharu Hattori , Manabu Abe , Jun Hasegawa , Takuma Iguchi , Tsuyoshi Karibe , Takashi Nakada , Koichiro Inaki , Reiko Kamei , Yuki Abe , Taisei Nomura , Jessica L Andersen , Sandro Santagata , Matthew L Hemming , Suzanne George , Toshihiko Doi , Atsushi Ochiai , George D Demetri , Toshinori Agatsuma

Genes with evidence of positive selection as potentially related to coloniality and the evolution of morphological features among the lophophorates and entoprocts.

Journal of experimental zoology. Part B, Molecular and developmental evolution
Avec: Scott Santagata

Copper induces cell death by targeting lipoylated TCA cycle proteins.

Science (New York, N.Y.)
Avec: Peter Tsvetkov , Shannon Coy , Boryana Petrova , Margaret Dreishpoon , Ana Verma , Mai Abdusamad , Jordan Rossen , Lena Joesch-Cohen , Ranad Humeidi , Ryan D Spangler , John K Eaton , Evgeni Frenkel , Mustafa Kocak , Steven M Corsello , Svetlana Lutsenko , Naama Kanarek , Sandro Santagata , Todd R Golub

Spatial genomics maps the structure, nature and evolution of cancer clones.

Nature
Avec: Artem Lomakin , Jessica Svedlund , Carina Strell , Milana Gataric , Artem Shmatko , Gleb Rukhovich , Jun Sung Park , Young Seok Ju , Stefan Dentro , Vitalii Kleshchevnikov , Vasyl Vaskivskyi , Tong Li , Omer Ali Bayraktar , Sarah Pinder , Andrea L Richardson , Sandro Santagata , Peter J Campbell , Hege Russnes , Moritz Gerstung , Mats Nilsson , Lucy R Yates

Hypermitotic meningiomas harbor DNA methylation subgroups with distinct biological and clinical features.

Neuro-oncology
Avec: Abrar Choudhury , William C Chen , Calixto-Hope G Lucas , James C Bayley , Akdes S Harmanci , Sybren L N Maas , Sandro Santagata , Tiemo Klisch , Arie Perry , Wenya Linda Bi , Felix Sahm , Akash J Patel , Stephen T Magill , David R Raleigh

Targeted gene expression profiling predicts meningioma outcomes and radiotherapy responses.

Nature medicine
Avec: William C Chen , Abrar Choudhury , Mark W Youngblood , Mei-Yin C Polley , Calixto-Hope G Lucas , Kanish Mirchia , Sybren L N Maas , Abigail K Suwala , Minhee Won , James C Bayley , Akdes S Harmanci , Arif O Harmanci , Tiemo J Klisch , Minh P Nguyen , Harish N Vasudevan , Kathleen McCortney , Theresa J Yu , Varun Bhave , Tai-Chung Lam , Jenny Kan-Suen Pu , Lai-Fung Li , Gilberto Ka-Kit Leung , Jason W Chan , Haley K Perlow , Joshua D Palmer , Christine Haberler , Anna S Berghoff , Matthias Preusser , Theodore P Nicolaides , Christian Mawrin , Sameer Agnihotri , Adam Resnick , Brian R Rood , Jessica Chew , Jacob S Young , Lauren Boreta , Steve E Braunstein , Jessica Schulte , Nicholas Butowski , Sandro Santagata , David Spetzler , Nancy Ann Oberheim Bush , Javier E Villanueva-Meyer , James P Chandler , David A Solomon , C Leland Rogers , Stephanie L Pugh , Minesh P Mehta , Penny K Sneed , Mitchel S Berger , Craig M Horbinski , Michael W McDermott , Arie Perry , Wenya Linda Bi , Akash J Patel , Felix Sahm , Stephen T Magill , David R Raleigh

Qualification of a multiplexed tissue imaging assay and detection of novel patterns of HER2 heterogeneity in breast cancer.

NPJ breast cancer
Avec: Jennifer L Guerriero , Jia-Ren Lin , Ricardo G Pastorello , Ziming Du , Yu-An Chen , Madeline G Townsend , Kenichi Shimada , Melissa E Hughes , Siyang Ren , Nabihah Tayob , Kelly Zheng , Shaolin Mei , Alyssa Patterson , Krishan L Taneja , Otto Metzger , Sara M Tolaney , Nancy U Lin , Deborah A Dillon , Stuart J Schnitt , Peter K Sorger , Elizabeth A Mittendorf , Sandro Santagata

High-plex immunofluorescence imaging and traditional histology of the same tissue section for discovering image-based biomarkers.

Nature cancer
Avec: Jia-Ren Lin , Yu-An Chen , Daniel Campton , Jeremy Cooper , Shannon Coy , Clarence Yapp , Juliann B Tefft , Erin McCarty , Keith L Ligon , Scott J Rodig , Steven Reese , Tad George , Sandro Santagata , Peter K Sorger

UnMICST: Deep learning with real augmentation for robust segmentation of highly multiplexed images of human tissues.

Communications biology
Avec: Clarence Yapp , Edward Novikov , Won-Dong Jang , Tuulia Vallius , Yu-An Chen , Marcelo Cicconet , Zoltan Maliga , Connor A Jacobson , Donglai Wei , Sandro Santagata , Hanspeter Pfister , Peter K Sorger

Phase II Study of Eribulin plus Pembrolizumab in Metastatic Soft Tissue Sarcomas: Clinical Outcomes and Biological Correlates.

Clinical cancer research : an official journal of the American Association for Cancer Research
Avec: Candace L Haddox , Michael J Nathenson , Emanuele Mazzola , Jia-Ren Lin , Joanna Baginska , Allison Nau , Jason L Weirather , Edwin Choy , Adrian Marino-Enriquez , Jeffrey A Morgan , Gregory M Cote , Priscilla Merriam , Andrew J Wagner , Peter K Sorger , Sandro Santagata , Suzanne George

Epigenetic and oncogenic inhibitors cooperatively drive differentiation and kill KRAS-mutant colorectal cancers.

Cancer discovery
Avec: Patrick Loi , Amy E Schade , Carrie L Rodriguez , Anjana Krishnan , Naiara Perurena , Van T M Nguyen , Yilin Xu , Marina Watanabe , Rachel A Davis , Alycia Gardner , Natalie F Pilla , Kaia Mattioli , Olesja Popow , Nuray Gunduz , Tamsin R M Lannagan , Samantha Fitzgerald , Ewa T Sicinska , Jia-Ren Lin , William Tan , Lauren K Brais , Kevin M Haigis , Marios Giannakis , Kimmie Ng , Sandro Santagata , Kristian Helin , Owen J Sansom , Karen Cichowski

AKT and EZH2 inhibitors kill TNBCs by hijacking mechanisms of involution.

Nature
Avec: Amy E Schade , Naiara Perurena , Yoona Yang , Carrie L Rodriguez , Anjana Krishnan , Alycia Gardner , Patrick Loi , Yilin Xu , Van T M Nguyen , G M Mastellone , Natalie F Pilla , Marina Watanabe , Keiichi Ota , Rachel A Davis , Kaia Mattioli , Dongxi Xiang , Jason J Zoeller , Jia-Ren Lin , Stefania Morganti , Ana C Garrido-Castro , Sara M Tolaney , Zhe Li , David A Barbie , Peter K Sorger , Kristian Helin , Sandro Santagata , Simon R V Knott , Karen Cichowski

Multimodal Spatial Profiling Reveals Immune Suppression and Microenvironment Remodeling in Fallopian Tube Precursors to High-Grade Serous Ovarian Carcinoma.

bioRxiv : the preprint server for biology
Avec: Tanjina Kader , Jia-Ren Lin , Clemens Hug , Shannon Coy , Yu-An Chen , Ino de Bruijn , Natalie Shih , Euihye Jung , Roxanne J Pelletier , Mariana Lopez Leon , Gabriel Mingo , Dalia Khaled Omran , Jong Suk Lee , Clarence Yapp , Baby Anusha Satravada , Ritika Kundra , Yilin Xu , Sabrina Chan , Juliann B Tefft , Jeremy Muhlich , Sarah Kim , Stefan M Gysler , Judith Agudo , James R Heath , Nikolaus Schultz , Charles Drescher , Peter K Sorger , Ronny Drapkin , Sandro Santagata

Genomic characterization of human brain metastases identifies drivers of metastatic lung adenocarcinoma.

Nature genetics
Avec: David J H Shih , Naema Nayyar , Ivanna Bihun , Ibiayi Dagogo-Jack , Corey M Gill , Elisa Aquilanti , Mia Bertalan , Alexander Kaplan , Megan R D'Andrea , Ugonma Chukwueke , Franziska Maria Ippen , Christopher Alvarez-Breckenridge , Nicholas D Camarda , Matthew Lastrapes , Devin McCabe , Ben Kuter , Benjamin Kaufman , Matthew R Strickland , Juan Carlos Martinez-Gutierrez , Deepika Nagabhushan , Magali De Sauvage , Michael D White , Brandyn A Castro , Kaitlin Hoang , Andrew Kaneb , Emily D Batchelor , Sun Ha Paek , Sun Hye Park , Maria Martinez-Lage , Anna S Berghoff , Parker Merrill , Elizabeth R Gerstner , Tracy T Batchelor , Matthew P Frosch , Ryan P Frazier , Darrell R Borger , A John Iafrate , Bruce E Johnson , Sandro Santagata , Matthias Preusser , Daniel P Cahill , Scott L Carter , Priscilla K Brastianos

MCMICRO: a scalable, modular image-processing pipeline for multiplexed tissue imaging.

Nature methods
Avec: Denis Schapiro , Artem Sokolov , Clarence Yapp , Yu-An Chen , Jeremy L Muhlich , Joshua Hess , Allison L Creason , Ajit J Nirmal , Gregory J Baker , Maulik K Nariya , Jia-Ren Lin , Zoltan Maliga , Connor A Jacobson , Matthew W Hodgman , Juha Ruokonen , Samouil L Farhi , Domenic Abbondanza , Eliot T McKinley , Daniel Persson , Courtney Betts , Shamilene Sivagnanam , Aviv Regev , Jeremy Goecks , Robert J Coffey , Lisa M Coussens , Sandro Santagata , Peter K Sorger

Individualized Screening Trial of Innovative Glioblastoma Therapy (INSIGhT): A Bayesian Adaptive Platform Trial to Develop Precision Medicines for Patients With Glioblastoma.

JCO precision oncology
Avec: Brian M Alexander , Lorenzo Trippa , Sarah Gaffey , Isabel C Arrillaga-Romany , Eudocia Q Lee , Mikael L Rinne , Manmeet S Ahluwalia , Howard Colman , Geoffrey Fell , Evanthia Galanis , John de Groot , Jan Drappatz , Andrew B Lassman , David M Meredith , L Burt Nabors , Sandro Santagata , David Schiff , Mary R Welch , Keith L Ligon , Patrick Y Wen

Minerva: a light-weight, narrative image browser for multiplexed tissue images.

Journal of open source software
Avec: John Hoffer , Rumana Rashid , Jeremy L Muhlich , Yu-An Chen , Douglas Peter William Russell , Juha Ruokonen , Robert Krueger , Hanspeter Pfister , Sandro Santagata , Peter K Sorger

A molecularly integrated grade for meningioma.

Neuro-oncology
Avec: Joseph Driver , Samantha E Hoffman , Sherwin Tavakol , Eleanor Woodward , Eduardo A Maury , Varun Bhave , Noah F Greenwald , Farshad Nassiri , Kenneth Aldape , Gelareh Zadeh , Abrar Choudhury , Harish N Vasudevan , Stephen T Magill , David R Raleigh , Malak Abedalthagafi , Ayal A Aizer , Brian M Alexander , Keith L Ligon , David A Reardon , Patrick Y Wen , Ossama Al-Mefty , Azra H Ligon , Adrian M Dubuc , Rameen Beroukhim , Elizabeth B Claus , Ian F Dunn , Sandro Santagata , Wenya Linda Bi

In PD-1+ human colon cancer cells NIVOLUMAB promotes survival and could protect tumor cells from conventional therapies.

Journal for immunotherapy of cancer
Avec: Caterina Ieranò , Dario Righelli , Crescenzo D'Alterio , Maria Napolitano , Luigi Portella , Giuseppina Rea , Federica Auletta , Sara Santagata , Anna Maria Trotta , Giuseppe Guardascione , Federica Liotti , Nella Prevete , Piera Maiolino , Antonio Luciano , Antonio Barbieri , Annabella Di Mauro , Cristin Roma , Riziero Esposito Abate , Fabiana Tatangelo , Roberto Pacelli , Nicola Normanno , Rosa Marina Melillo , Stefania Scala

Single-cell tumor-immune microenvironment of BRCA1/2 mutated high-grade serous ovarian cancer.

Nature communications
Avec: I-M Launonen , N Lyytikäinen , J Casado , E A Anttila , A Szabó , U-M Haltia , C A Jacobson , J R Lin , Z Maliga , B E Howitt , K C Strickland , S Santagata , K Elias , A D D'Andrea , P A Konstantinopoulos , P K Sorger , A Färkkilä

2D and 3D multiplexed subcellular profiling of nuclear instability in human cancer.

bioRxiv : the preprint server for biology
Avec: Shannon Coy , Brian Cheng , Jong Suk Lee , Rumana Rashid , Lindsay Browning , Yilin Xu , Sankha S Chakrabarty , Clarence Yapp , Sabrina Chan , Juliann B Tefft , Emily Scott , Alexander Spektor , Keith L Ligon , Gregory J Baker , David Pellman , Peter K Sorger , Sandro Santagata

Quality Control for Single Cell Analysis of High-plex Tissue Profiles using CyLinter.

bioRxiv : the preprint server for biology
Avec: Gregory J Baker , Edward Novikov , Ziyuan Zhao , Tuulia Vallius , Janae A Davis , Jia-Ren Lin , Jeremy L Muhlich , Elizabeth A Mittendorf , Sandro Santagata , Jennifer L Guerriero , Peter K Sorger

Comprehensive analysis reveals potential therapeutic targets and an integrated risk stratification model for solitary fibrous tumors.

Nature communications
Avec: Renjing Zhang , Yang Yang , Chunfang Hu , Mayan Huang , Wenjian Cen , Dongyi Ling , Yakang Long , Xin-Hua Yang , Boheng Xu , Junling Peng , Sujie Wang , Weijie Zhu , Mingbiao Wei , Jiaojiao Yang , Yuxia Xu , Xu Zhang , Jiangjun Ma , Fang Wang , Hongtu Zhang , Peiqing Ma , Xiaojun Zhu , Guohui Song , Li-Yue Sun , De-Shen Wang , Feng-Hua Wang , Yu-Hong Li , Sandro Santagata , Qin Li , Yan-Fen Feng , Ziming Du

Multiplexed 3D Analysis of Cell Plasticity and Immune Niches in Melanoma.

bioRxiv : the preprint server for biology
Avec: Clarence Yapp , Ajit J Nirmal , Felix Zhou , Zoltan Maliga , Paula Montero Llopis , George F Murphy , Christine G Lian , Gaudenz Danuser , Sandro Santagata , Peter K Sorger

Stitching and registering highly multiplexed whole-slide images of tissues and tumors using ASHLAR.

Bioinformatics (Oxford, England)
Avec: Jeremy L Muhlich , Yu-An Chen , Clarence Yapp , Douglas Russell , Sandro Santagata , Peter K Sorger

Visinity: Visual Spatial Neighborhood Analysis for Multiplexed Tissue Imaging Data.

IEEE transactions on visualization and computer graphics
Avec: Simon Warchol , Robert Krueger , Ajit Johnson Nirmal , Giorgio Gaglia , Jared Jessup , Cecily C Ritch , John Hoffer , Jeremy Muhlich , Megan L Burger , Tyler Jacks , Sandro Santagata , Peter K Sorger , Hanspeter Pfister

Targeted gene expression profiling predicts meningioma outcomes and radiotherapy responses.

Research square
Avec: David Raleigh , William Chen , Abrar Choudhury , Mark Youngblood , Mei-Yin Polley , Calixto-Hope Lucas , Kanish Mirchia , Sybren Maas , Abigail Suwala , Minhee Won , James Bayley , Akdes Harmanci , Arif Harmanci , Tiemo Klisch , Minh Nguyen , Harish Vasudevan , Kathleen McCortney , Theresa Yu , Varun Bhave , Tai-Chung Lam , Jenny Pu , Gilberto Leung , Jason Chang , Haley Perlow , Joshua Palmer , Christine Haberler , Anna Berghoff , Matthias Preusser , Theodore Nicolaides , Christian Mawrin , Sameer Agnihotri , Adam Resnick , Brian Rood , Jessica Chew , Jacob Young , Lauren Boreta , Steve Braunstein , Jessica Schulte , Nicholas Butowski , Sandro Santagata , David Spetzler , Nancy Ann Oberheim Bush , Javier Villanueva-Meyer , James Chandler , David Solomon , C Rogers , Stephanie Pugh , Minesh Mehta , Penny Sneed , Mitchel Berger , Craig Horbinski , Michael McDermott , Arie Perry , Wenya Bi , Akash Patel , Felix Sahm , Stephen Magill

BRAF-MEK Inhibition in Newly Diagnosed Papillary Craniopharyngiomas.

The New England journal of medicine
Avec: Priscilla K Brastianos , Erin Twohy , Susan Geyer , Elizabeth R Gerstner , Timothy J Kaufmann , Shervin Tabrizi , Brian Kabat , Julia Thierauf , Michael W Ruff , Daniela A Bota , David A Reardon , Adam L Cohen , Macarena I De La Fuente , Glenn J Lesser , Jian Campian , Pankaj K Agarwalla , Priya Kumthekar , Bhupinder Mann , Shivangi Vora , Michael Knopp , A John Iafrate , William T Curry , Daniel P Cahill , Helen A Shih , Paul D Brown , Sandro Santagata , Fred G Barker , Evanthia Galanis

Chemical QuantArray: A Quantitative Tool for Mass Spectrometry Imaging.

Analytical chemistry
Avec: Sylwia A Stopka , Daniela Ruiz , Gerard Baquer , Clément Bodineau , Md Amin Hossain , Valentina T Pellens , Michael S Regan , Olivier Pourquié , Marcia C Haigis , Wenya L Bi , Shannon M Coy , Sandro Santagata , Nathalie Y R Agar , Sankha S Basu

Impact of H3K27 trimethylation loss in meningiomas: a meta-analysis.

Acta neuropathologica communications
Avec: Gregory Cello , Ruchit V Patel , James Tanner McMahon , Sandro Santagata , Wenya Linda Bi

STMND1 is A Phylogenetically Ancient Stathmin which Localizes to Motile Cilia and Exhibits Nuclear Translocation that Is Inhibited When Soluble Tubulin Concentration Increases.

Molecular biology of the cell
Avec: Xiang Deng , Bryan O Seguinot , Gary Bradshaw , Jong Suk Lee , Shannon Coy , Marian Kalocsay , Sandro Santagata , Timothy Mitchison

Papillary Craniopharyngioma: an integrative and comprehensive review.

Endocrine reviews
Avec: Ruth Prieto , Tareq A Juratli , Evan D Bander , Sandro Santagata , Laura Barrios , Priscilla K Brastianos , Theodore H Schwartz , José M Pascual

ZNFX1 is a Novel Master Regulator in Epigenetically-induced Pathogen Mimicry and Inflammasome Signaling in Cancer.

bioRxiv : the preprint server for biology
Avec: Lora Stojanovic , Rachel Abbotts , Kaushlendra Tripathi , Collin M Coon , Saranya Rajendran , Elnaz Abbasi Farid , Galen Hostetter , Joseph W Guarnieri , Douglas C Wallace , Sheng Liu , Jun Wan , Gennaro Calendo , Rebecca Marker , Zahra Gohari , Mohammed M A Inayatullah , Vijay K Tiwari , Tanjina Kader , Sandro Santagata , Ronny Drapkin , Stefan Kommoss , Jacobus Pfisterer , Gottfried E Konecny , Ryan Coopergard , Jean-Pierre Issa , Boris J N Winterhoff , Michael J Topper , George E Sandusky , Kathy D Miller , Stephen B Baylin , Kenneth P Nephew , Feyruz V Rassool

Mechanisms and therapeutic implications of hypermutation in gliomas.

Nature
Avec: Mehdi Touat , Yvonne Y Li , Adam N Boynton , Liam F Spurr , J Bryan Iorgulescu , Craig L Bohrson , Isidro Cortes-Ciriano , Cristina Birzu , Jack E Geduldig , Kristine Pelton , Mary Jane Lim-Fat , Sangita Pal , Ruben Ferrer-Luna , Shakti H Ramkissoon , Frank Dubois , Charlotte Bellamy , Naomi Currimjee , Juliana Bonardi , Kenin Qian , Patricia Ho , Seth Malinowski , Leon Taquet , Robert E Jones , Aniket Shetty , Kin-Hoe Chow , Radwa Sharaf , Dean Pavlick , Lee A Albacker , Nadia Younan , Capucine Baldini , Maïté Verreault , Marine Giry , Erell Guillerm , Samy Ammari , Frédéric Beuvon , Karima Mokhtari , Agusti Alentorn , Caroline Dehais , Caroline Houillier , Florence Laigle-Donadey , Dimitri Psimaras , Eudocia Q Lee , Lakshmi Nayak , J Ricardo McFaline-Figueroa , Alexandre Carpentier , Philippe Cornu , Laurent Capelle , Bertrand Mathon , Jill S Barnholtz-Sloan , Arnab Chakravarti , Wenya Linda Bi , E Antonio Chiocca , Katie Pricola Fehnel , Sanda Alexandrescu , Susan N Chi , Daphne Haas-Kogan , Tracy T Batchelor , Garrett M Frampton , Brian M Alexander , Raymond Y Huang , Azra H Ligon , Florence Coulet , Jean-Yves Delattre , Khê Hoang-Xuan , David M Meredith , Sandro Santagata , Alex Duval , Marc Sanson , Andrew D Cherniack , Patrick Y Wen , David A Reardon , Aurélien Marabelle , Peter J Park , Ahmed Idbaih , Rameen Beroukhim , Pratiti Bandopadhayay , Franck Bielle , Keith L Ligon

A Deregulated HOX Gene Axis Confers an Epigenetic Vulnerability in KRAS-Mutant Lung Cancers.

Cancer cell
Avec: Stephanie L Guerra , Ophélia Maertens , Ryan Kuzmickas , Thomas De Raedt , Richard O Adeyemi , Caroline J Guild , Shawna Guillemette , Amanda J Redig , Emily S Chambers , Man Xu , Hong Tiv , Sandro Santagata , Pasi A Jänne , Stephen J Elledge , Karen Cichowski

Localized Metabolomic Gradients in Patient-Derived Xenograft Models of Glioblastoma.

Cancer research
Avec: Elizabeth C Randall , Begoña G C Lopez , Sen Peng , Michael S Regan , Walid M Abdelmoula , Sankha S Basu , Sandro Santagata , Haejin Yoon , Marcia C Haigis , Jeffrey N Agar , Nhan L Tran , William F Elmquist , Forest M White , Jann N Sarkaria , Nathalie Y R Agar

Electrocatalytic nanostructured ferric tannate as platform for enzyme conjugation: Electrochemical determination of phenolic compounds.

Bioelectrochemistry (Amsterdam, Netherlands)
Avec: Massimiliano Magro , Davide Baratella , Veronica Colò , Francesca Vallese , Carlo Nicoletto , Silvia Santagata , Paolo Sambo , Simone Molinari , Gabriella Salviulo , Andrea Venerando , Caroline R Basso , Valber A Pedrosa , Fabio Vianello

Mitochondrial metabolism promotes adaptation to proteotoxic stress.

Nature chemical biology
Avec: Peter Tsvetkov , Alexandre Detappe , Kai Cai , Heather R Keys , Zarina Brune , Weiwen Ying , Prathapan Thiru , Mairead Reidy , Guillaume Kugener , Jordan Rossen , Mustafa Kocak , Nora Kory , Aviad Tsherniak , Sandro Santagata , Luke Whitesell , Irene M Ghobrial , John L Markley , Susan Lindquist , Todd R Golub

Rapid MALDI mass spectrometry imaging for surgical pathology.

NPJ precision oncology
Avec: Sankha S Basu , Michael S Regan , Elizabeth C Randall , Walid M Abdelmoula , Amanda R Clark , Begoña Gimenez-Cassina Lopez , Dale S Cornett , Andreas Haase , Sandro Santagata , Nathalie Y R Agar

CXCR4 and CXCR7 Signaling Pathways: A Focus on the Cross-Talk Between Cancer Cells and Tumor Microenvironment.

Frontiers in oncology
Avec: Sara Santagata , Caterina Ieranò , Anna Maria Trotta , Anna Capiluongo , Federica Auletta , Giuseppe Guardascione , Stefania Scala

Simultaneous determination of 5-hydroxytryptophan and 3-O-methyldopa in dried blood spot by UPLC-MS/MS: A useful tool for the diagnosis of L-amino acid decarboxylase deficiency.

Journal of chromatography. B, Analytical technologies in the biomedical and life sciences
Avec: Emanuele Di Carlo , Silvia Santagata , Luca Sauro , Manuela Tolve , Filippo Manti , Vincenzo Leuzzi , Antonio Angeloni , Claudia Carducci

Multimodal platform for assessing drug distribution and response in clinical trials.

Neuro-oncology
Avec: Begoña G C Lopez , Ishwar N Kohale , Ziming Du , Ilya Korsunsky , Walid M Abdelmoula , Yang Dai , Sylwia A Stopka , Giorgio Gaglia , Elizabeth C Randall , Michael S Regan , Sankha S Basu , Amanda R Clark , Bianca-Maria Marin , Ann C Mladek , Danielle M Burgenske , Jeffrey N Agar , Jeffrey G Supko , Stuart A Grossman , Louis B Nabors , Soumya Raychaudhuri , Keith L Ligon , Patrick Y Wen , Brian Alexander , Eudocia Q Lee , Sandro Santagata , Jann Sarkaria , Forest M White , Nathalie Y R Agar

Skull Base Tumors: Neuropathology and Clinical Implications.

Neurosurgery
Avec: Wenya Linda Bi , Sandro Santagata

Interim clinical trial analysis of intraoperative mass spectrometry for breast cancer surgery.

NPJ breast cancer
Avec: Sankha S Basu , Sylwia A Stopka , Walid M Abdelmoula , Elizabeth C Randall , Begoña Gimenez-Cassina Lopez , Michael S Regan , David Calligaris , Fake F Lu , Isaiah Norton , Melissa A Mallory , Sandro Santagata , Deborah A Dillon , Mehra Golshan , Nathalie Y R Agar

Clinical utility of targeted next-generation sequencing assay in IDH-wildtype glioblastoma for therapy decision-making.

Neuro-oncology
Avec: Mary Jane Lim-Fat , Gilbert C Youssef , Mehdi Touat , J Bryan Iorgulescu , Sydney Whorral , Marie Allen , Rifaquat Rahman , Ugonma Chukwueke , J Ricardo McFaline-Figueroa , Lakshmi Nayak , Eudocia Q Lee , Tracy T Batchelor , Omar Arnaout , Pier Paolo Peruzzi , E Antonio Chiocca , David A Reardon , David Meredith , Sandro Santagata , Rameen Beroukhim , Wenya Linda Bi , Keith L Ligon , Patrick Y Wen

3-Methylglutaconic Aciduria Type I Due to

International journal of molecular sciences
Avec: Francesca Nardecchia , Anna Caciotti , Teresa Giovanniello , Sabrina De Leo , Lorenzo Ferri , Serena Galosi , Silvia Santagata , Barbara Torres , Laura Bernardini , Claudia Carducci , Amelia Morrone , Vincenzo Leuzzi

Spatial transcriptomics.

Cancer cell
Avec: Ana C Anderson , Itai Yanai , Lucy R Yates , Linghua Wang , Alexander Swarbrick , Peter Sorger , Sandro Santagata , Wolf H Fridman , Qiang Gao , Livnat Jerby , Benjamin Izar , Lulu Shang , Xiang Zhou

Single cell spatial analysis reveals the topology of immunomodulatory purinergic signaling in glioblastoma.

Nature communications
Avec: Shannon Coy , Shu Wang , Sylwia A Stopka , Jia-Ren Lin , Clarence Yapp , Cecily C Ritch , Lisa Salhi , Gregory J Baker , Rumana Rashid , Gerard Baquer , Michael Regan , Prasidda Khadka , Kristina A Cole , Jaeho Hwang , Patrick Y Wen , Pratiti Bandopadhayay , Mariarita Santi , Thomas De Raedt , Keith L Ligon , Nathalie Y R Agar , Peter K Sorger , Mehdi Touat , Sandro Santagata

Multiplexed 3D atlas of state transitions and immune interaction in colorectal cancer.

Cell
Avec: Jia-Ren Lin , Shu Wang , Shannon Coy , Yu-An Chen , Clarence Yapp , Madison Tyler , Maulik K Nariya , Cody N Heiser , Ken S Lau , Sandro Santagata , Peter K Sorger

USP9X mediates an acute adaptive response to MAPK suppression in pancreatic cancer but creates multiple actionable therapeutic vulnerabilities.

Cell reports. Medicine
Avec: Naiara Perurena , Rebecca Lock , Rachel A Davis , Srivatsan Raghavan , Natalie F Pilla , Raymond Ng , Patrick Loi , Caroline J Guild , Abigail L Miller , Ewa Sicinska , James M Cleary , Douglas A Rubinson , Brian M Wolpin , Nathanael S Gray , Sandro Santagata , William C Hahn , Jennifer P Morton , Owen J Sansom , Andrew J Aguirre , Karen Cichowski

Hepatocellular carcinoma (HCC) tumor microenvironment is more suppressive than colorectal cancer liver metastasis (CRLM) tumor microenvironment.

Hepatology international
Avec: Sara Santagata , Giuseppina Rea , Daniela Castaldo , Maria Napolitano , Anna Capiluongo , Crescenzo D'Alterio , Anna Maria Trotta , Caterina Ieranò , Luigi Portella , Salvatore Di Maro , Fabiana Tatangelo , Vittorio Albino , Rita Guarino , Carmen Cutolo , Francesco Izzo , Stefania Scala

Meet the authors: Dr. Clint Allen and Dr. Sandro Santagata.

Cancer cell
Avec: Clint Allen , Sandro Santagata

Endocrine Therapy Synergizes with SMAC Mimetics to Potentiate Antigen Presentation and Tumor Regression in Hormone Receptor-Positive Breast Cancer.

Cancer research
Avec: Francisco Hermida-Prado , Yingtian Xie , Shira Sherman , Zsuzsanna Nagy , Douglas Russo , Tara Akhshi , Zhengtao Chu , Avery Feit , Marco Campisi , Minyue Chen , Agostina Nardone , Cristina Guarducci , Klothilda Lim , Alba Font-Tello , Irene Lee , Juana García-Pedrero , Israel Cañadas , Judith Agudo , Ying Huang , Tal Sella , Qingchun Jin , Nabihah Tayob , Elizabeth A Mittendorf , Sara M Tolaney , Xintao Qiu , Henry Long , William F Symmans , Jia-Ren Lin , Sandro Santagata , Isabelle Bedrosian , Denise A Yardley , Ingrid A Mayer , Edward T Richardson , Giacomo Oliveira , Catherine J Wu , Eugene F Schuster , Mitch Dowsett , Alana L Welm , David Barbie , Otto Metzger , Rinath Jeselsohn

Inaugural Results of the Individualized Screening Trial of Innovative Glioblastoma Therapy: A Phase II Platform Trial for Newly Diagnosed Glioblastoma Using Bayesian Adaptive Randomization.

Journal of clinical oncology : official journal of the American Society of Clinical Oncology
Avec: Rifaquat Rahman , Lorenzo Trippa , Eudocia Q Lee , Isabel Arrillaga-Romany , Geoffrey Fell , Mehdi Touat , Christine McCluskey , Jennifer Wiley , Sarah Gaffey , Jan Drappatz , Mary R Welch , Evanthia Galanis , Manmeet S Ahluwalia , Howard Colman , L Burt Nabors , Jaroslaw Hepel , Heinrich Elinzano , David Schiff , Ugonma N Chukwueke , Rameen Beroukhim , Lakshmi Nayak , J Ricardo McFaline-Figueroa , Tracy T Batchelor , Mikael L Rinne , Thomas J Kaley , Christine Lu-Emerson , Ingo K Mellinghoff , Wenya Linda Bi , Omar Arnaout , Pier Paolo Peruzzi , Daphne Haas-Kogan , Shyam Tanguturi , Daniel Cagney , Ayal Aizer , Lisa Doherty , Maria Lavallee , Brittany Fisher-Longden , Shanna Dowling , Jack Geduldig , Fiona Watkinson , William Pisano , Seth Malinowski , Shakti Ramkissoon , Sandro Santagata , David M Meredith , E Antonio Chiocca , David A Reardon , Brian M Alexander , Keith L Ligon , Patrick Y Wen

Systematic characterization of antibody-drug conjugate targets in central nervous system tumors.

Neuro-oncology
Avec: Shannon Coy , Jong Suk Lee , Sabrina J Chan , Terri Woo , Jacquelyn Jones , Sanda Alexandrescu , Patrick Y Wen , Peter K Sorger , Keith L Ligon , Sandro Santagata

Cell state dependent effects of Bmal1 on melanoma immunity and tumorigenicity.

Nature communications
Avec: Xue Zhang , Shishir M Pant , Cecily C Ritch , Hsin-Yao Tang , Hongguang Shao , Harsh Dweep , Yao-Yu Gong , Rebekah Brooks , Patricia Brafford , Adam J Wolpaw , Yool Lee , Ashani Weeraratna , Amita Sehgal , Meenhard Herlyn , Andrew Kossenkov , David Speicher , Peter K Sorger , Sandro Santagata , Chi V Dang

Genomic and Immunophenotypic Landscape of Acquired Resistance to PD-(L)1 Blockade in Non-Small-Cell Lung Cancer.

Journal of clinical oncology : official journal of the American Society of Clinical Oncology
Avec: Biagio Ricciuti , Giuseppe Lamberti , Sreekar R Puchala , Navin R Mahadevan , Jia-Ren Lin , Joao V Alessi , Alexander Chowdhury , Yvonne Y Li , Xinan Wang , Liam Spurr , Federica Pecci , Alessandro Di Federico , Deepti Venkatraman , Adriana P Barrichello , Malini Gandhi , Victor R Vaz , Andy J Pangilinan , Danielle Haradon , Elinton Lee , Hersh Gupta , Kathleen L Pfaff , Emma L Welsh , Mizuki Nishino , Andrew D Cherniack , Bruce E Johnson , Jason L Weirather , Ian D Dryg , Scott J Rodig , Lynette M Sholl , Peter Sorger , Sandro Santagata , Renato Umeton , Mark M Awad

Réseau de co-auteurs

Sandro Santagata 55 collaborations
Peter K Sorger 21 collaborations
Jia-Ren Lin 16 collaborations
Shannon Coy 12 collaborations
Keith L Ligon 11 collaborations
Clarence Yapp 10 collaborations
Yu-An Chen 10 collaborations
Wenya Linda Bi 8 collaborations
Patrick Y Wen 8 collaborations
Rumana Rashid 7 collaborations
Nathalie Y R Agar 6 collaborations
Rameen Beroukhim 5 collaborations
Hanspeter Pfister 5 collaborations
Jeremy L Muhlich 5 collaborations
Eudocia Q Lee 5 collaborations
David A Reardon 5 collaborations
Michael S Regan 5 collaborations
Sankha S Basu 5 collaborations
Giorgio Gaglia 4 collaborations
Robert Krueger 4 collaborations
John Hoffer 4 collaborations
Cecily C Ritch 4 collaborations
Abrar Choudhury 4 collaborations
Yilin Xu 4 collaborations
Karen Cichowski 4 collaborations
Jong Suk Lee 4 collaborations
Tracy T Batchelor 4 collaborations
Gregory J Baker 4 collaborations
Brian M Alexander 4 collaborations
Sylwia A Stopka 4 collaborations
Mehdi Touat 4 collaborations
Elizabeth C Randall 4 collaborations
Walid M Abdelmoula 4 collaborations
Pratiti Bandopadhayay 3 collaborations
Jeremy Muhlich 3 collaborations
Arie Perry 3 collaborations
Felix Sahm 3 collaborations
Stephen T Magill 3 collaborations
David R Raleigh 3 collaborations
Varun Bhave 3 collaborations
Matthias Preusser 3 collaborations
Ziming Du 3 collaborations
Sara M Tolaney 3 collaborations
Elizabeth A Mittendorf 3 collaborations
Juliann B Tefft 3 collaborations
Zoltan Maliga 3 collaborations
Patrick Loi 3 collaborations
Naiara Perurena 3 collaborations
Rachel A Davis 3 collaborations
Natalie F Pilla 3 collaborations
Priscilla K Brastianos 3 collaborations
Evanthia Galanis 3 collaborations
David M Meredith 3 collaborations
Caterina Ieranò 3 collaborations
Anna Maria Trotta 3 collaborations
Stefania Scala 3 collaborations
Lakshmi Nayak 3 collaborations
J Ricardo McFaline-Figueroa 3 collaborations
E Antonio Chiocca 3 collaborations
Silvia Santagata 3 collaborations
Luke Whitesell 2 collaborations
Patricia Ho 2 collaborations
Kenin Qian 2 collaborations
Frank Dubois 2 collaborations
Noah F Greenwald 2 collaborations
Prasidda Khadka 2 collaborations
William C Hahn 2 collaborations
Aviad Tsherniak 2 collaborations
Jared Jessup 2 collaborations
Simon Warchol 2 collaborations
Matthew L Hemming 2 collaborations
Jessica L Andersen 2 collaborations
Emanuele Mazzola 2 collaborations
Amr H Abdelhamid Ahmed 2 collaborations
George D Demetri 2 collaborations
Suzanne George 2 collaborations
Peter Tsvetkov 2 collaborations
Jordan Rossen 2 collaborations
Mustafa Kocak 2 collaborations
Todd R Golub 2 collaborations
Lucy R Yates 2 collaborations
William C Chen 2 collaborations
Calixto-Hope G Lucas 2 collaborations
James C Bayley 2 collaborations
Akdes S Harmanci 2 collaborations
Sybren L N Maas 2 collaborations
Tiemo Klisch 2 collaborations
Akash J Patel 2 collaborations
Kanish Mirchia 2 collaborations
Minhee Won 2 collaborations
Harish N Vasudevan 2 collaborations
Kathleen McCortney 2 collaborations
Tai-Chung Lam 2 collaborations
Christine Haberler 2 collaborations
Anna S Berghoff 2 collaborations
Christian Mawrin 2 collaborations
Sameer Agnihotri 2 collaborations
Adam Resnick 2 collaborations
Jessica Chew 2 collaborations
Lauren Boreta 2 collaborations
Jessica Schulte 2 collaborations
Nicholas Butowski 2 collaborations
David Spetzler 2 collaborations
Nancy Ann Oberheim Bush 2 collaborations
Jennifer L Guerriero 2 collaborations
Nabihah Tayob 2 collaborations
Otto Metzger 2 collaborations
Deborah A Dillon 2 collaborations
Scott J Rodig 2 collaborations
Edward Novikov 2 collaborations
Tuulia Vallius 2 collaborations
Connor A Jacobson 2 collaborations
Jason L Weirather 2 collaborations
Amy E Schade 2 collaborations
Carrie L Rodriguez 2 collaborations
Anjana Krishnan 2 collaborations
Van T M Nguyen 2 collaborations
Marina Watanabe 2 collaborations
Alycia Gardner 2 collaborations
Kaia Mattioli 2 collaborations
Kristian Helin 2 collaborations
Owen J Sansom 2 collaborations
Tanjina Kader 2 collaborations
Sabrina Chan 2 collaborations
Judith Agudo 2 collaborations
Ronny Drapkin 2 collaborations
Ugonma Chukwueke 2 collaborations
Elizabeth R Gerstner 2 collaborations
A John Iafrate 2 collaborations
Bruce E Johnson 2 collaborations
Daniel P Cahill 2 collaborations
Ajit J Nirmal 2 collaborations
Maulik K Nariya 2 collaborations
Juha Ruokonen 2 collaborations
Lorenzo Trippa 2 collaborations
Sarah Gaffey 2 collaborations
Mikael L Rinne 2 collaborations
Manmeet S Ahluwalia 2 collaborations
Howard Colman 2 collaborations
Geoffrey Fell 2 collaborations
Jan Drappatz 2 collaborations
L Burt Nabors 2 collaborations
David Schiff 2 collaborations
Mary R Welch 2 collaborations
Azra H Ligon 2 collaborations
Crescenzo D'Alterio 2 collaborations
Maria Napolitano 2 collaborations
Luigi Portella 2 collaborations
Giuseppina Rea 2 collaborations
Federica Auletta 2 collaborations
Giuseppe Guardascione 2 collaborations
Fabiana Tatangelo 2 collaborations
Gerard Baquer 2 collaborations
Marcia C Haigis 2 collaborations
Yvonne Y Li 2 collaborations
J Bryan Iorgulescu 2 collaborations
Mary Jane Lim-Fat 2 collaborations
Seth Malinowski 2 collaborations
Sanda Alexandrescu 2 collaborations
Daphne Haas-Kogan 2 collaborations
Andrew D Cherniack 2 collaborations
Thomas De Raedt 2 collaborations
Caroline J Guild 2 collaborations
Begoña G C Lopez 2 collaborations
Jeffrey N Agar 2 collaborations
Forest M White 2 collaborations
Amanda R Clark 2 collaborations
Begoña Gimenez-Cassina Lopez 2 collaborations
Anna Capiluongo 2 collaborations
Vincenzo Leuzzi 2 collaborations
Claudia Carducci 2 collaborations
Rifaquat Rahman 2 collaborations
Omar Arnaout 2 collaborations
Pier Paolo Peruzzi 2 collaborations
Peter Sorger 2 collaborations
Shu Wang 2 collaborations
Gaurav N Joshi 1 collaboration
Carmen G Li 1 collaboration
Susan L Lindquist 1 collaboration
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Federica Piccioni 1 collaboration
Ryan O'Rourke 1 collaboration
Elizabeth M Gonzalez 1 collaboration
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Emily Girard 1 collaboration
Margo Coxon 1 collaboration
Matthew G Rees 1 collaboration
Lisa Brenan 1 collaboration
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Claire Sinai 1 collaboration
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Adam Tracy 1 collaboration
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Fred C Lam 1 collaboration
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Michael B Yaffe 1 collaboration
Till Milde 1 collaboration
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Jun Qi 1 collaboration
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Sarah Pinder 1 collaboration
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Brian R Rood 1 collaboration
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James P Chandler 1 collaboration
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Boheng Xu 1 collaboration
Junling Peng 1 collaboration
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Joshua Palmer 1 collaboration
Anna Berghoff 1 collaboration
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James Chandler 1 collaboration
David Solomon 1 collaboration
C Rogers 1 collaboration
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