Sarah Denayer

Affiliations

National Reference Laboratory for Shiga Toxin-Producing Escherichia coli (NRL STEC), Foodborne Pathogens, Sciensano, Brussels, Belgium.

Publications (20)

Towards Real-Time and Affordable Strain-Level Metagenomics-Based Foodborne Outbreak Investigations Using Oxford Nanopore Sequencing Technologies.

Frontiers in microbiology

Avec: Florence E Buytaers , Assia Saltykova , Sarah Denayer , Bavo Verhaegen , Kevin Vanneste , Nancy H C Roosens , Denis Piérard , Kathleen Marchal , Sigrid C J De Keersmaecker

Staphylococcal Enterotoxin Gene Cluster: Prediction of Enterotoxin (SEG and SEI) Production and of the Source of Food Poisoning on the Basis of

Applied and environmental microbiology

Avec: L Schwendimann , D Merda , T Berger , S Denayer , C Feraudet-Tarisse , A J Kläui , S Messio , M Y Mistou , Y Nia , J A Hennekinne , H U Graber

Genomic monitoring of SARS-CoV-2 variants using sentinel SARI hospital surveillance.

Influenza and other respiratory viruses

Avec: Sarah Denayer , François E Dufrasne , Bert Monsieurs , Reinout van Eycken , Sarah Houben , Lucie Seyler , Thomas Demuyser , Els van Nedervelde , Marc Bourgeois , Bénédicte Delaere , Koen Magerman , Door Jouck , Bénédicte Lissoir , Catherine Sion , Marijke Reynders , Evelyn Petit , Nicolas Dauby , Marc Hainaut , Lies Laenen , Piet Maes , Guy Baele , Simon Dellicour , Lize Cuypers , Emmanuel André , Simon Couvreur , Ruben Brondeel , Cyril Barbezange , Nathalie Bossuyt , Steven van Gucht

Strategy for the identification of micro-organisms producing food and feed products: Bacteria producing food enzymes as study case.

Food chemistry

Avec: Marie Deckers , Kevin Vanneste , Raf Winand , Sigrid C J De Keersmaecker , Sarah Denayer , Marc Heyndrickx , Dieter Deforce , Marie-Alice Fraiture , Nancy H C Roosens

Validation strategy of a bioinformatics whole genome sequencing workflow for Shiga toxin-producing

Microbial genomics

Avec: Bert Bogaerts , Stéphanie Nouws , Bavo Verhaegen , Sarah Denayer , Julien Van Braekel , Raf Winand , Qiang Fu , Florence Crombé , Denis Piérard , Kathleen Marchal , Nancy H C Roosens , Sigrid C J De Keersmaecker , Kevin Vanneste

Application of a strain-level shotgun metagenomics approach on food samples: resolution of the source of a

Microbial genomics

Avec: Florence E Buytaers , Assia Saltykova , Wesley Mattheus , Bavo Verhaegen , Nancy H C Roosens , Kevin Vanneste , Valeska Laisnez , Naïma Hammami , Brigitte Pochet , Vera Cantaert , Kathleen Marchal , Sarah Denayer , Sigrid C J De Keersmaecker

Vaccine effectiveness against COVID-19 hospitalisation in adults (≥ 20 years) during Alpha- and Delta-dominant circulation: I-MOVE-COVID-19 and VEBIS SARI VE networks, Europe, 2021.

Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin

Avec: Angela Mc Rose , Nathalie Nicolay , Virginia Sandonis Martín , Clara Mazagatos , Goranka Petrović , F Annabel Niessen , Ausenda Machado , Odile Launay , Sarah Denayer , Lucie Seyler , Joaquin Baruch , Cristina Burgui , Isabela I Loghin , Lisa Domegan , Roberta Vaikutytė , Petr Husa , George Panagiotakopoulos , Nassera Aouali , Ralf Dürrwald , Jennifer Howard , Francisco Pozo , Bartolomé Sastre-Palou , Diana Nonković , Mirjam J Knol , Irina Kislaya , Liem Binh Luong Nguyen , Nathalie Bossuyt , Thomas Demuyser , Aušra Džiugytė , Iván Martínez-Baz , Corneliu Popescu , Róisín Duffy , Monika Kuliešė , Lenka Součková , Stella Michelaki , Marc Simon , Janine Reiche , María Teresa Otero-Barrós , Zvjezdana Lovrić Makarić , Patricia Cjl Bruijning-Verhagen , Verónica Gomez , Zineb Lesieur , Cyril Barbezange , Els Van Nedervelde , Maria-Louise Borg , Jesús Castilla , Mihaela Lazar , Joan O'Donnell , Indrė Jonikaitė , Regina Demlová , Marina Amerali , Gil Wirtz , Kristin Tolksdorf , Marta Valenciano , Sabrina Bacci , Esther Kissling , Auteur inconnu , Auteur inconnu , Auteur inconnu

A pan-European ring trial to validate an International Standard for detection of Vibrio cholerae, Vibrio parahaemolyticus and Vibrio vulnificus in seafoods.

International journal of food microbiology

Avec: R E Hartnell , L Stockley , W Keay , J-P Rosec , D Hervio-Heath , H Van den Berg , F Leoni , D Ottaviani , U Henigman , S Denayer , B Serbruyns , F Georgsson , G Krumova-Valcheva , E Gyurova , C Blanco , S Copin , E Strauch , K Wieczorek , M Lopatek , A Britova , G Hardouin , B Lombard , P In't Veld , A Leclercq , C Baker-Austin

Transforming Shiga toxin-producing

Frontiers in microbiology

Avec: Stéphanie Nouws , Bavo Verhaegen , Sarah Denayer , Florence Crombé , Denis Piérard , Bert Bogaerts , Kevin Vanneste , Kathleen Marchal , Nancy H C Roosens , Sigrid C J De Keersmaecker

Vaccine effectiveness against COVID-19 hospitalisation in adults (≥ 20 years) during Omicron-dominant circulation: I-MOVE-COVID-19 and VEBIS SARI VE networks, Europe, 2021 to 2022.

Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin

Avec: Angela Mc Rose , Nathalie Nicolay , Virginia Sandonis Martín , Clara Mazagatos , Goranka Petrović , Joaquin Baruch , Sarah Denayer , Lucie Seyler , Lisa Domegan , Odile Launay , Ausenda Machado , Cristina Burgui , Roberta Vaikutyte , F Annabel Niessen , Isabela I Loghin , Petr Husa , Nassera Aouali , George Panagiotakopoulos , Kristin Tolksdorf , Judit Krisztina Horváth , Jennifer Howard , Francisco Pozo , Virtudes Gallardo , Diana Nonković , Aušra Džiugytė , Nathalie Bossuyt , Thomas Demuyser , Róisín Duffy , Liem Binh Luong Nguyen , Irina Kislaya , Iván Martínez-Baz , Giedre Gefenaite , Mirjam J Knol , Corneliu Popescu , Lenka Součková , Marc Simon , Stella Michelaki , Janine Reiche , Annamária Ferenczi , Concepción Delgado-Sanz , Zvjezdana Lovrić Makarić , John Paul Cauchi , Cyril Barbezange , Els Van Nedervelde , Joan O'Donnell , Christine Durier , Raquel Guiomar , Jesús Castilla , Indrė Jonikaite , Patricia Cjl Bruijning-Verhagen , Mihaela Lazar , Regina Demlová , Gil Wirtz , Marina Amerali , Ralf Dürrwald , Mihály Pál Kunstár , Esther Kissling , Sabrina Bacci , Marta Valenciano , Auteur inconnu , Auteur inconnu , Auteur inconnu

Outbreak of Central American born Shigella sonnei in two youth camps in Belgium in the summer of 2019.

European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology

Avec: An Van den Bossche , Pieter-Jan Ceyssens , Sarah Denayer , Naïma Hammami , Maaike van den Beld , Timothy J Dallman , Wesley Mattheus

An international outbreak of Salmonella enterica serotype Enteritidis linked to eggs from Poland: a microbiological and epidemiological study.

The Lancet. Infectious diseases

Avec: Roan Pijnacker , Timothy J Dallman , Aloys S L Tijsma , Gillian Hawkins , Lesley Larkin , Saara M Kotila , Giusi Amore , Ettore Amato , Pamina M Suzuki , Sarah Denayer , Sofieke Klamer , Judit Pászti , Jacquelyn McCormick , Hassan Hartman , Gareth J Hughes , Lin C T Brandal , Derek Brown , Joël Mossong , Cecilia Jernberg , Luise Müller , Daniel Palm , Ettore Severi , Joannna Gołębiowska , Blaženka Hunjak , Slawomir Owczarek , Simon Le Hello , Patricia Garvey , Kirsten Mooijman , Ingrid H M Friesema , Coen van der Weijden , Menno van der Voort , Valentina Rizzi , Eelco Franz , Auteur inconnu

The Benefits of Whole Genome Sequencing for Foodborne Outbreak Investigation from the Perspective of a National Reference Laboratory in a Smaller Country.

Foods (Basel, Switzerland)

Avec: Stéphanie Nouws , Bert Bogaerts , Bavo Verhaegen , Sarah Denayer , Florence Crombé , Klara De Rauw , Denis Piérard , Kathleen Marchal , Kevin Vanneste , Nancy H C Roosens , Sigrid C J De Keersmaecker

Whole Genome Sequencing Provides an Added Value to the Investigation of Staphylococcal Food Poisoning Outbreaks.

Frontiers in microbiology

Avec: Stéphanie Nouws , Bert Bogaerts , Bavo Verhaegen , Sarah Denayer , Lasse Laeremans , Kathleen Marchal , Nancy H C Roosens , Kevin Vanneste , Sigrid C J De Keersmaecker

Metagenomics to Detect and Characterize Viruses in Food Samples at Genome Level? Lessons Learnt from a Norovirus Study.

Foods (Basel, Switzerland)

Avec: Florence E Buytaers , Bavo Verhaegen , Mathieu Gand , Jolien D'aes , Kevin Vanneste , Nancy H C Roosens , Kathleen Marchal , Sarah Denayer , Sigrid C J De Keersmaecker

Strain-Level Metagenomic Data Analysis of Enriched In Vitro and In Silico Spiked Food Samples: Paving the Way towards a Culture-Free Foodborne Outbreak Investigation Using STEC as a Case Study.

International journal of molecular sciences

Avec: Assia Saltykova , Florence E Buytaers , Sarah Denayer , Bavo Verhaegen , Denis Piérard , Nancy H C Roosens , Kathleen Marchal , Sigrid C J De Keersmaecker

A Practical Method to Implement Strain-Level Metagenomics-Based Foodborne Outbreak Investigation and Source Tracking in Routine.

Microorganisms

Avec: Florence E Buytaers , Assia Saltykova , Sarah Denayer , Bavo Verhaegen , Kevin Vanneste , Nancy H C Roosens , Denis Piérard , Kathleen Marchal , Sigrid C J De Keersmaecker

NAuRA: Genomic Tool to Identify Staphylococcal Enterotoxins in

Frontiers in microbiology

Avec: Déborah Merda , Arnaud Felten , Noémie Vingadassalon , Sarah Denayer , Yacine Titouche , Lucia Decastelli , Bernadette Hickey , Christos Kourtis , Hristo Daskalov , Michel-Yves Mistou , Jacques-Antoine Hennekinne

Impact of DNA extraction on whole genome sequencing analysis for characterization and relatedness of Shiga toxin-producing Escherichia coli isolates.

Scientific reports

Avec: Stéphanie Nouws , Bert Bogaerts , Bavo Verhaegen , Sarah Denayer , Denis Piérard , Kathleen Marchal , Nancy H C Roosens , Kevin Vanneste , Sigrid C J De Keersmaecker

Influence of reduced levels or suppression of sodium nitrite on the outgrowth and toxinogenesis of psychrotrophic Clostridium botulinum Group II type B in cooked ham.

International journal of food microbiology

Avec: S Lebrun , T Van Nieuwenhuysen , S Crèvecoeur , R Vanleyssem , J Thimister , S Denayer , S Jeuge , G Daube , A Clinquart , B Fremaux

Réseau de co-auteurs

Nancy H C Roosens 11 collaborations

Sigrid C J De Keersmaecker 11 collaborations

Bavo Verhaegen 10 collaborations

Kevin Vanneste 10 collaborations

Kathleen Marchal 10 collaborations

Denis Piérard 7 collaborations

None None 7 collaborations

Florence E Buytaers 5 collaborations

Bert Bogaerts 5 collaborations

Stéphanie Nouws 5 collaborations

Assia Saltykova 4 collaborations

S Denayer 3 collaborations

Lucie Seyler 3 collaborations

Thomas Demuyser 3 collaborations

Cyril Barbezange 3 collaborations

Nathalie Bossuyt 3 collaborations

Florence Crombé 3 collaborations

Raf Winand 2 collaborations

Wesley Mattheus 2 collaborations

Naïma Hammami 2 collaborations

Angela Mc Rose 2 collaborations

Nathalie Nicolay 2 collaborations

Virginia Sandonis Martín 2 collaborations

Clara Mazagatos 2 collaborations

Goranka Petrović 2 collaborations

F Annabel Niessen 2 collaborations

Ausenda Machado 2 collaborations

Odile Launay 2 collaborations

Joaquin Baruch 2 collaborations

Cristina Burgui 2 collaborations

Isabela I Loghin 2 collaborations

Lisa Domegan 2 collaborations

Petr Husa 2 collaborations

George Panagiotakopoulos 2 collaborations

Nassera Aouali 2 collaborations

Ralf Dürrwald 2 collaborations

Jennifer Howard 2 collaborations

Francisco Pozo 2 collaborations

Diana Nonković 2 collaborations

Mirjam J Knol 2 collaborations

Irina Kislaya 2 collaborations

Liem Binh Luong Nguyen 2 collaborations

Aušra Džiugytė 2 collaborations

Iván Martínez-Baz 2 collaborations

Corneliu Popescu 2 collaborations

Róisín Duffy 2 collaborations

Lenka Součková 2 collaborations

Stella Michelaki 2 collaborations

Marc Simon 2 collaborations

Janine Reiche 2 collaborations

Zvjezdana Lovrić Makarić 2 collaborations

Patricia Cjl Bruijning-Verhagen 2 collaborations

Els Van Nedervelde 2 collaborations

Jesús Castilla 2 collaborations

Mihaela Lazar 2 collaborations

Joan O'Donnell 2 collaborations

Regina Demlová 2 collaborations

Marina Amerali 2 collaborations

Gil Wirtz 2 collaborations

Kristin Tolksdorf 2 collaborations

Marta Valenciano 2 collaborations

Sabrina Bacci 2 collaborations

Esther Kissling 2 collaborations

Timothy J Dallman 2 collaborations

L Schwendimann 1 collaboration

D Merda 1 collaboration

T Berger 1 collaboration

C Feraudet-Tarisse 1 collaboration

A J Kläui 1 collaboration

S Messio 1 collaboration

M Y Mistou 1 collaboration

Y Nia 1 collaboration

J A Hennekinne 1 collaboration

H U Graber 1 collaboration

François E Dufrasne 1 collaboration

Bert Monsieurs 1 collaboration

Reinout van Eycken 1 collaboration

Sarah Houben 1 collaboration

Els van Nedervelde 1 collaboration

Marc Bourgeois 1 collaboration

Bénédicte Delaere 1 collaboration

Koen Magerman 1 collaboration

Door Jouck 1 collaboration

Bénédicte Lissoir 1 collaboration

Catherine Sion 1 collaboration

Marijke Reynders 1 collaboration

Evelyn Petit 1 collaboration

Nicolas Dauby 1 collaboration

Marc Hainaut 1 collaboration

Lies Laenen 1 collaboration

Piet Maes 1 collaboration

Guy Baele 1 collaboration

Simon Dellicour 1 collaboration

Lize Cuypers 1 collaboration

Emmanuel André 1 collaboration

Simon Couvreur 1 collaboration

Ruben Brondeel 1 collaboration

Steven van Gucht 1 collaboration

Marie Deckers 1 collaboration

Marc Heyndrickx 1 collaboration

Dieter Deforce 1 collaboration

Marie-Alice Fraiture 1 collaboration

Julien Van Braekel 1 collaboration

Qiang Fu 1 collaboration

Valeska Laisnez 1 collaboration

Brigitte Pochet 1 collaboration

Vera Cantaert 1 collaboration

Roberta Vaikutytė 1 collaboration

Bartolomé Sastre-Palou 1 collaboration

Monika Kuliešė 1 collaboration

María Teresa Otero-Barrós 1 collaboration

Verónica Gomez 1 collaboration

Zineb Lesieur 1 collaboration

Maria-Louise Borg 1 collaboration

Indrė Jonikaitė 1 collaboration

R E Hartnell 1 collaboration

L Stockley 1 collaboration

W Keay 1 collaboration

J-P Rosec 1 collaboration

D Hervio-Heath 1 collaboration

H Van den Berg 1 collaboration

F Leoni 1 collaboration

D Ottaviani 1 collaboration

U Henigman 1 collaboration

B Serbruyns 1 collaboration

F Georgsson 1 collaboration

G Krumova-Valcheva 1 collaboration

E Gyurova 1 collaboration

C Blanco 1 collaboration

S Copin 1 collaboration

E Strauch 1 collaboration

K Wieczorek 1 collaboration

M Lopatek 1 collaboration

A Britova 1 collaboration

G Hardouin 1 collaboration

B Lombard 1 collaboration

P In't Veld 1 collaboration

A Leclercq 1 collaboration

C Baker-Austin 1 collaboration

Roberta Vaikutyte 1 collaboration

Judit Krisztina Horváth 1 collaboration

Virtudes Gallardo 1 collaboration

Giedre Gefenaite 1 collaboration

Annamária Ferenczi 1 collaboration

Concepción Delgado-Sanz 1 collaboration

John Paul Cauchi 1 collaboration

Christine Durier 1 collaboration

Raquel Guiomar 1 collaboration

Indrė Jonikaite 1 collaboration

Mihály Pál Kunstár 1 collaboration

An Van den Bossche 1 collaboration

Pieter-Jan Ceyssens 1 collaboration

Maaike van den Beld 1 collaboration

Roan Pijnacker 1 collaboration

Aloys S L Tijsma 1 collaboration

Gillian Hawkins 1 collaboration

Lesley Larkin 1 collaboration

Saara M Kotila 1 collaboration

Giusi Amore 1 collaboration

Ettore Amato 1 collaboration

Pamina M Suzuki 1 collaboration

Sofieke Klamer 1 collaboration

Judit Pászti 1 collaboration

Jacquelyn McCormick 1 collaboration

Hassan Hartman 1 collaboration

Gareth J Hughes 1 collaboration

Lin C T Brandal 1 collaboration

Derek Brown 1 collaboration

Joël Mossong 1 collaboration

Cecilia Jernberg 1 collaboration

Luise Müller 1 collaboration

Daniel Palm 1 collaboration

Ettore Severi 1 collaboration

Joannna Gołębiowska 1 collaboration

Blaženka Hunjak 1 collaboration

Slawomir Owczarek 1 collaboration

Simon Le Hello 1 collaboration

Patricia Garvey 1 collaboration

Kirsten Mooijman 1 collaboration

Ingrid H M Friesema 1 collaboration

Coen van der Weijden 1 collaboration

Menno van der Voort 1 collaboration

Valentina Rizzi 1 collaboration

Eelco Franz 1 collaboration

Klara De Rauw 1 collaboration

Lasse Laeremans 1 collaboration

Mathieu Gand 1 collaboration

Jolien D'aes 1 collaboration

Déborah Merda 1 collaboration

Arnaud Felten 1 collaboration

Noémie Vingadassalon 1 collaboration

Yacine Titouche 1 collaboration

Lucia Decastelli 1 collaboration

Bernadette Hickey 1 collaboration

Christos Kourtis 1 collaboration

Hristo Daskalov 1 collaboration

Michel-Yves Mistou 1 collaboration

Jacques-Antoine Hennekinne 1 collaboration

S Lebrun 1 collaboration

T Van Nieuwenhuysen 1 collaboration

S Crèvecoeur 1 collaboration

R Vanleyssem 1 collaboration

J Thimister 1 collaboration

S Jeuge 1 collaboration

G Daube 1 collaboration

A Clinquart 1 collaboration

B Fremaux 1 collaboration