Deleterious Variation in BRSK2 Associates with a Neurodevelopmental Disorder.


Journal

American journal of human genetics
ISSN: 1537-6605
Titre abrégé: Am J Hum Genet
Pays: United States
ID NLM: 0370475

Informations de publication

Date de publication:
04 04 2019
Historique:
received: 28 11 2018
accepted: 01 02 2019
pubmed: 19 3 2019
medline: 6 2 2020
entrez: 19 3 2019
Statut: ppublish

Résumé

Developmental delay and intellectual disability (DD and ID) are heterogeneous phenotypes that arise in many rare monogenic disorders. Because of this rarity, developing cohorts with enough individuals to robustly identify disease-associated genes is challenging. Social-media platforms that facilitate data sharing among sequencing labs can help to address this challenge. Through one such tool, GeneMatcher, we identified nine DD- and/or ID-affected probands with a rare, heterozygous variant in the gene encoding the serine/threonine-protein kinase BRSK2. All probands have a speech delay, and most present with intellectual disability, motor delay, behavioral issues, and autism. Six of the nine variants are predicted to result in loss of function, and computational modeling predicts that the remaining three missense variants are damaging to BRSK2 structure and function. All nine variants are absent from large variant databases, and BRSK2 is, in general, relatively intolerant to protein-altering variation among humans. In all six probands for whom parents were available, the mutations were found to have arisen de novo. Five of these de novo variants were from cohorts with at least 400 sequenced probands; collectively, the cohorts span 3,429 probands, and the observed rate of de novo variation in these cohorts is significantly higher than the estimated background-mutation rate (p = 2.46 × 10

Identifiants

pubmed: 30879638
pii: S0002-9297(19)30047-3
doi: 10.1016/j.ajhg.2019.02.002
pmc: PMC6451696
pii:
doi:

Substances chimiques

Brsk2 protein, human EC 2.7.11.1
Protein Serine-Threonine Kinases EC 2.7.11.1

Types de publication

Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

701-708

Subventions

Organisme : NIEHS NIH HHS
ID : K01 ES025435
Pays : United States
Organisme : NHGRI NIH HHS
ID : UM1 HG007301
Pays : United States

Informations de copyright

Copyright © 2019 American Society of Human Genetics. Published by Elsevier Inc. All rights reserved.

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Auteurs

Susan M Hiatt (SM)

HudsonAlpha Institute for Biotechnology, Huntsville, AL 35806, USA.

Michelle L Thompson (ML)

HudsonAlpha Institute for Biotechnology, Huntsville, AL 35806, USA.

Jeremy W Prokop (JW)

Department of Pediatrics and Human Development, Michigan State University, East Lansing, MI 48824, USA.

James M J Lawlor (JMJ)

HudsonAlpha Institute for Biotechnology, Huntsville, AL 35806, USA.

David E Gray (DE)

HudsonAlpha Institute for Biotechnology, Huntsville, AL 35806, USA.

E Martina Bebin (EM)

Department of Neurology, University of Alabama Birmingham, Birmingham, AL 35294, USA.

Tuula Rinne (T)

Department of Human Genetics, Radboud University Medical Center, 6500 HB Nijmegen, the Netherlands.

Marlies Kempers (M)

Department of Human Genetics, Radboud University Medical Center, 6500 HB Nijmegen, the Netherlands.

Rolph Pfundt (R)

Department of Human Genetics, Radboud University Medical Center, 6500 HB Nijmegen, the Netherlands.

Bregje W van Bon (BW)

Department of Human Genetics, Radboud University Medical Center, 6500 HB Nijmegen, the Netherlands.

Cyril Mignot (C)

Département de Génétique, Groupe Hospitalier Pitié-Salpêtrière, Assistance Publique - Hôpitaux de Paris, Paris 75013, France; Centres de Référence Maladies Rares, Déficiences Intellectuelles de Causes Rares, Paris 75013, France; Groupes de Recherche Clinique Paris Sorbonne Déficience Intellectuelle et Autisme, Paris 75013, France.

Caroline Nava (C)

Département de Génétique, Groupe Hospitalier Pitié-Salpêtrière, Assistance Publique - Hôpitaux de Paris, Paris 75013, France; Faculté de Médecine, Institut du Cerveau et de la Moelle épinière, Sorbonne Université, Paris 75013, France.

Christel Depienne (C)

Faculté de Médecine, Institut du Cerveau et de la Moelle épinière, Sorbonne Université, Paris 75013, France; Institute of Human Genetics, University Hospital Essen, University of Duisburg-Essen, Essen 45147, Germany.

Louisa Kalsner (L)

Connecticut Children's Medical Center, Farmington, CT 06032, USA.

Anita Rauch (A)

Institute of Medical Genetics, University of Zurich, Schlieren 8952, Switzerland; Radiz-Rare Disease Initiative Zurich, Clinical Research Priority Program, University of Zurich, Zurich 8032, Switzerland.

Pascal Joset (P)

Institute of Medical Genetics, University of Zurich, Schlieren 8952, Switzerland.

Ruxandra Bachmann-Gagescu (R)

Institute of Medical Genetics, University of Zurich, Schlieren 8952, Switzerland.

Ingrid M Wentzensen (IM)

GeneDx, Gaithersburg, MD 20877, USA.

Kirsty McWalter (K)

GeneDx, Gaithersburg, MD 20877, USA.

Gregory M Cooper (GM)

HudsonAlpha Institute for Biotechnology, Huntsville, AL 35806, USA. Electronic address: gcooper@hudsonalpha.org.

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