The Iberian legacy into a young genetic xeroderma pigmentosum cluster in central Brazil.
Brazil
/ epidemiology
Consanguinity
DNA-Directed DNA Polymerase
/ genetics
Europe
/ epidemiology
Exons
Female
Genetics, Population
Haplotypes
Heterozygote
Homozygote
Human Migration
Humans
Inheritance Patterns
Introns
Male
Mutation
Phenotype
Reproductive Isolation
Xeroderma Pigmentosum
/ epidemiology
Ancestry
DNA repair
Founder mutations
Genetic cluster
POLH(XPV)
Xeroderma pigmentosum
Journal
Mutation research. Genetic toxicology and environmental mutagenesis
ISSN: 1879-3592
Titre abrégé: Mutat Res Genet Toxicol Environ Mutagen
Pays: Netherlands
ID NLM: 101632149
Informations de publication
Date de publication:
Apr 2020
Apr 2020
Historique:
received:
28
12
2019
revised:
22
02
2020
accepted:
25
02
2020
entrez:
9
4
2020
pubmed:
9
4
2020
medline:
22
4
2020
Statut:
ppublish
Résumé
In central Brazil, in the municipality of Faina (state of Goiás), the small and isolated village of Araras comprises a genetic cluster of xeroderma pigmentosum (XP) patients. The high level of consanguinity and the geographical isolation gave rise to a high frequency of XP patients. Recently, two founder events were identified affecting that community, with two independent mutations at the POLH gene, c.764 + 1 G > A (intron 6) and c.907 C > T; p.Arg303* (exon 8). These deleterious mutations lead to the xeroderma pigmentosum variant syndrome (XP-V). Previous reports identified both mutations in other countries: the intron 6 mutation in six patients (four families) from Northern Spain (Basque Country and Cantabria) and the exon 8 mutation in two patients from different families in Europe, one of them from Kosovo. In order to investigate the ancestry of the XP patients and the age for these mutations at Araras, we generated genotyping information for 22 XP-V patients from Brazil (16), Spain (6) and Kosovo (1). The local genomic ancestry and the shared haplotype segments among the patients showed that the intron 6 mutation at Araras is associated with an Iberian genetic legacy. All patients from Goiás, homozygotes for intron 6 mutation, share with the Spanish patients identical-by-descent (IBD) genomic segments comprising the mutation. The entrance date for the Iberian haplotype at the village was calculated to be approximately 200 years old. This result is in agreement with the historical arrival of Iberian individuals at the Goiás state (BR). Patients from Goiás and the three families from Spain share 1.8 cM (family 14), 1.7 cM (family 15), and a more significant segment of 4.7 cM within family 13. On the other hand, the patients carrying the exon 8 mutation do not share any specific genetic segment, indicating an old genetic distance between them or even no common ancestry.
Identifiants
pubmed: 32265042
pii: S1383-5718(20)30034-6
doi: 10.1016/j.mrgentox.2020.503164
pii:
doi:
Substances chimiques
DNA-Directed DNA Polymerase
EC 2.7.7.7
Rad30 protein
EC 2.7.7.7
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
503164Informations de copyright
Copyright © 2020 Elsevier B.V. All rights reserved.
Déclaration de conflit d'intérêts
Declarations of Competing Interest The authors declare no competing or conflict interests.