Diversity of nonribosomal peptide synthetase and polyketide synthase gene clusters in the genus Acrocarpospora.

Actinobacteria / genetics Base Sequence Genome, Bacterial / genetics Multigene Family / genetics Peptide Biosynthesis, Nucleic Acid-Independent / genetics Peptide Synthases / genetics Polyketide Synthases / genetics Sequence Analysis, DNA Whole Genome Sequencing
Acrocarpospora corrugate Acrocarpospora macrocephala Acrocarpospora pleiomorpha actinomycete genome nonribosomal peptide polyketide secondary metabolite

Journal

The Journal of general and applied microbiology
ISSN: 1349-8037
Titre abrégé: J Gen Appl Microbiol
Pays: Japan
ID NLM: 0165543

Informations de publication

Date de publication:
26 Feb 2021
Historique:
pubmed: 18 8 2020
medline: 26 8 2021
entrez: 18 8 2020
Statut: ppublish

Résumé

Acrocarpospora is a rare, recently established actinomycete genus of the family Streptosporangiaceae. In the present study, we sequenced whole genomes of the type strains of Acrocarpospora corrugate, Acrocarpospora macrocephala, and Acrocarpospora pleiomorpha to assess their potency as secondary metabolite producers; we then surveyed their nonribosomal peptide synthetase (NRPS) and polyketide synthase (PKS) gene clusters. The genome sizes of A. corrugate NBRC 13972

Identifiants

DOI: 10.2323/jgam.2020.01.001 PMID: 32801283
pubmed: 32801283
doi: 10.2323/jgam.2020.01.001
doi:

Substances chimiques

Polyketide Synthases 79956-01-7
Peptide Synthases EC 6.3.2.-
non-ribosomal peptide synthase EC 6.3.2.-

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

315-322

Auteurs

Hisayuki Komaki (H)

Biological Resource Center, National Institute of Technology and Evaluation (NBRC).

Akio Oguchi (A)

NBRC.

Tomohiko Tamura (T)

Biological Resource Center, National Institute of Technology and Evaluation (NBRC).

Moriyuki Hamada (M)

Biological Resource Center, National Institute of Technology and Evaluation (NBRC).

Natsuko Ichikawa (N)

NBRC.

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Classifications MeSH

questionsmedicales.fr › Bactéries › Bactéries à Gram positif › Bâtonnets à Gram positif › Bâtonnets asporogènes à Gram positif › Bâtonnets asporogènes irréguliers à Gram positif › Actinobacteria › Diversity of nonribosomal peptide synthetase...
questionsmedicales.fr › Sciences de l'information › Sources d'information › Services d'information › Documentation › Données de séquences moléculaires › Séquence nucléotidique › Diversity of nonribosomal peptide synthetase...
questionsmedicales.fr › Phénomènes génétiques › Structures génétiques › Génome › Génome microbien › Génome bactérien › Diversity of nonribosomal peptide synthetase...
questionsmedicales.fr › Phénomènes génétiques › Structures génétiques › Génome › Composants de génome › Gènes › Famille multigénique › Diversity of nonribosomal peptide synthetase...
questionsmedicales.fr › Métabolisme › Biosynthèse des peptides › Biosynthèse non ribosomique des peptides › Diversity of nonribosomal peptide synthetase...
questionsmedicales.fr › Enzymes et coenzymes › Enzymes › Ligases › Carbon-nitrogen ligases › Amino-acid ligases › Diversity of nonribosomal peptide synthetase...
questionsmedicales.fr › Enzymes et coenzymes › Enzymes › Complexes multienzymatiques › Polyketide synthases › Diversity of nonribosomal peptide synthetase...
questionsmedicales.fr › Techniques d'investigation › Techniques génétiques › Analyse de séquence › Analyse de séquence d'ADN › Diversity of nonribosomal peptide synthetase...
questionsmedicales.fr › Techniques d'investigation › Techniques génétiques › Analyse de séquence › Analyse de séquence d'ADN › Séquençage du génome entier › Diversity of nonribosomal peptide synthetase...