Complete genome sequence of pleioblastus mosaic virus, a distinct member of the genus Potyvirus.
Journal
Archives of virology
ISSN: 1432-8798
Titre abrégé: Arch Virol
Pays: Austria
ID NLM: 7506870
Informations de publication
Date de publication:
Feb 2021
Feb 2021
Historique:
received:
12
08
2020
accepted:
26
10
2020
pubmed:
3
1
2021
medline:
5
2
2021
entrez:
2
1
2021
Statut:
ppublish
Résumé
Pleioblastus mosaic virus (PleMV) is a tentative member of the genus Potyvirus in the family Potyviridae and was discovered in bamboo with mosaic symptoms in Tokyo, Japan. Since no information on the genome sequence of PleMV has been reported, its taxonomic position has long been uncertain. Here, we report the first complete genome sequences of two distinct PleMV isolates. Excluding the 3'-terminal poly(A) tail, their genomic RNA sequences consist of 9,634 and 9,643 nucleotides (nt); both contain a large open reading frame (ORF) encoding a polyprotein and a small ORF termed PIPO. The large ORFs of the two isolates share 79.2% and 87.6% sequence identity at the nucleotide (nt) and amino acid (aa) level, respectively, and were found to have the highest nt and aa sequence identity (69.0% and 69.9%) to the potyvirus johnsongrass mosaic virus (JGMV). Phylogenetic analysis showed that PleMV is most closely related to JGMV but forms its own clade. These results suggest that PleMV is a distinct member of the genus Potyvirus.
Identifiants
pubmed: 33386489
doi: 10.1007/s00705-020-04916-9
pii: 10.1007/s00705-020-04916-9
doi:
Substances chimiques
Polyproteins
0
RNA, Viral
0
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
645-649Subventions
Organisme : Japan Society for the Promotion of Science
ID : 19K23660
Organisme : Japan Society for the Promotion of Science
ID : 20J23036
Organisme : Japan Society for the Promotion of Science
ID : 17H03770
Organisme : Japan Society for the Promotion of Science
ID : 19K15805
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