Fetal hydrops and the Incremental yield of Next-generation sequencing over standard prenatal Diagnostic testing (FIND) study: prospective cohort study and meta-analysis.


Journal

Ultrasound in obstetrics & gynecology : the official journal of the International Society of Ultrasound in Obstetrics and Gynecology
ISSN: 1469-0705
Titre abrégé: Ultrasound Obstet Gynecol
Pays: England
ID NLM: 9108340

Informations de publication

Date de publication:
Oct 2021
Historique:
revised: 25 03 2021
received: 02 02 2021
accepted: 29 03 2021
pubmed: 14 4 2021
medline: 15 12 2021
entrez: 13 4 2021
Statut: ppublish

Résumé

To determine the incremental yield of exome sequencing (ES) over chromosomal microarray analysis (CMA) or karyotyping in prenatally diagnosed non-immune hydrops fetalis (NIHF). A prospective cohort study (comprising an extended group of the Prenatal Assessment of Genomes and Exomes (PAGE) study) was performed which included 28 cases of prenatally diagnosed NIHF undergoing trio ES following negative CMA or karyotyping. These cases were combined with data from a systematic review of the literature. MEDLINE, EMBASE, CINAHL and ClinicalTrials.gov databases were searched electronically (January 2000 to October 2020) for studies reporting on the incremental yield of ES over CMA or karyotyping in fetuses with prenatally detected NIHF. Inclusion criteria for the systematic review were: (i) at least two cases of NIHF undergoing sequencing; (ii) testing initiated based on prenatal ultrasound-based phenotype; and (iii) negative CMA or karyotyping result. The incremental diagnostic yield of ES was assessed in: (i) all cases of NIHF; (ii) isolated NIHF; (iii) NIHF associated with an additional fetal structural anomaly; and (iv) NIHF according to severity (i.e. two vs three or more cavities affected). In the extended PAGE study cohort, the additional diagnostic yield of ES over CMA or karyotyping was 25.0% (7/28) in all NIHF cases, 21.4% (3/14) in those with isolated NIHF and 28.6% (4/14) in those with non-isolated NIHF. In the meta-analysis, the pooled incremental yield based on 21 studies (306 cases) was 29% (95% CI, 24-34%; P < 0.00001; I Use of prenatal next-generation sequencing in both isolated and non-isolated NIHF should be considered in the development of clinical pathways. Given the wide range of potential syndromic diagnoses and heterogeneity in the prenatal phenotype of NIHF, exome or whole-genome sequencing may prove to be a more appropriate testing approach than a targeted gene panel testing strategy. © 2021 The Authors. Ultrasound in Obstetrics & Gynecology published by John Wiley & Sons Ltd on behalf of International Society of Ultrasound in Obstetrics and Gynecology.

Identifiants

pubmed: 33847422
doi: 10.1002/uog.23652
pmc: PMC8487902
mid: NIHMS1695948
doi:

Types de publication

Journal Article Meta-Analysis Systematic Review

Langues

eng

Sous-ensembles de citation

IM

Pagination

509-518

Subventions

Organisme : Wellcome Trust
Pays : United Kingdom
Organisme : British Heart Foundation
ID : FS/18/79/33932
Pays : United Kingdom
Organisme : NICHD NIH HHS
ID : K12 HD001262
Pays : United States
Organisme : Health Innovation Challenge from the UK Department of Health and Wellcome Trust
ID : HICF-R7-396

Informations de copyright

© 2021 The Authors. Ultrasound in Obstetrics & Gynecology published by John Wiley & Sons Ltd on behalf of International Society of Ultrasound in Obstetrics and Gynecology.

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Auteurs

F Mone (F)

Institute of Metabolism and Systems Research, College of Medical & Dental Sciences, University of Birmingham, Edgbaston, Birmingham, UK.
Fetal Medicine Centre, Birmingham Women's and Children's NHS Foundation Trust, Birmingham, UK.

R Y Eberhardt (RY)

Wellcome Sanger Institute, Hinxton, UK.

M E Hurles (ME)

Wellcome Sanger Institute, Hinxton, UK.

D J Mcmullan (DJ)

West Midlands Regional Genetics Service, Birmingham Women's and Children's NHS Foundation Trust, Birmingham, UK.

E R Maher (ER)

Department of Medical Genetics, University of Cambridge, Cambridge, UK.
NIHR Cambridge Biomedical Research Centre, Cambridge, UK.
Department of Clinical Genetics, Cambridge University Hospitals NHS Foundation Trust, Cambridge, UK.

J Lord (J)

Wellcome Sanger Institute, Hinxton, UK.

L S Chitty (LS)

North Thames Genomic Laboratory Hub, Great Ormond Street NHS Foundation Trust, London, UK.
UCL Great Ormond Street Institute of Child Health, London, UK.

E Dempsey (E)

Molecular and Clinical Sciences, St George's University of London, London, UK.

T Homfray (T)

SW Thames Regional Genetics Department, St George's University Hospitals NHS Foundation Trust, London, UK.

J L Giordano (JL)

Institute for Genomic Medicine, Columbia University Medical Center, New York, NY, USA.
Division of Maternal-Fetal Medicine, Department of Obstetrics and Gynecology, Columbia University Vagelos Medical Center, New York, NY, USA.

R J Wapner (RJ)

Institute for Genomic Medicine, Columbia University Medical Center, New York, NY, USA.
Division of Maternal-Fetal Medicine, Department of Obstetrics and Gynecology, Columbia University Vagelos Medical Center, New York, NY, USA.

L Sun (L)

Fetal Medicine Unit and Prenatal Diagnosis Center, Shanghai First Maternity and Infant Hospital of Tongji University, Shanghai, China.

T N Sparks (TN)

Center for Maternal-Fetal Precision Medicine, Division of Maternal-Fetal Medicine, University of California, San Francisco, CA, USA.

M E Norton (ME)

Center for Maternal-Fetal Precision Medicine, Division of Maternal-Fetal Medicine, University of California, San Francisco, CA, USA.

M D Kilby (MD)

Institute of Metabolism and Systems Research, College of Medical & Dental Sciences, University of Birmingham, Edgbaston, Birmingham, UK.
Fetal Medicine Centre, Birmingham Women's and Children's NHS Foundation Trust, Birmingham, UK.

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