Characterization of Atypical Shiga Toxin Gene Sequences and Description of Stx2j, a New Subtype.

Canada Escherichia coli Infections Escherichia coli Proteins / genetics Genome, Bacterial Shiga Toxin / genetics Shiga-Toxigenic Escherichia coli / classification
Escherichia coli Shiga toxin Stx2j Stx2o genome sequence

Journal

Journal of clinical microbiology
ISSN: 1098-660X
Titre abrégé: J Clin Microbiol
Pays: United States
ID NLM: 7505564

Informations de publication

Date de publication:
16 03 2022
Historique:
pubmed: 1 3 2022
medline: 3 5 2022
entrez: 28 2 2022
Statut: ppublish

Résumé

Shiga toxin (Stx) is the definitive virulence factor of Shiga toxin-producing Escherichia coli (STEC). Stx variants are currently organized into a taxonomic system of three Stx1 (a, c, and d) and seven Stx2 (a, b, c, d, e, f, and g) subtypes. In this study, seven STEC isolates from food and clinical samples possessing

Identifiants

DOI: 10.1128/jcm.02229-21 PMID: 35225693 PMC: PMC8925903
pubmed: 35225693
doi: 10.1128/jcm.02229-21
pmc: PMC8925903
doi:

Substances chimiques

Escherichia coli Proteins 0
Shiga Toxin 75757-64-1

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

e0222921

Références

Epidemiol Infect. 2008 Jun;136(6):761-70
pubmed: 17672927
J Appl Microbiol. 2017 Sep;123(3):570-581
pubmed: 28383815
Bioinformatics. 2018 Aug 1;34(15):2666-2669
pubmed: 29547981
Nat Rev Genet. 2011 Nov 29;13(1):36-46
pubmed: 22124482
Infect Immun. 2011 Mar;79(3):1329-37
pubmed: 21199911
Eur J Clin Microbiol Infect Dis. 1994 Dec;13(12):1074-6
pubmed: 7889973
Microb Pathog. 1993 Nov;15(5):399-405
pubmed: 8015420
Proc Biol Sci. 2007 Aug 22;274(1621):1921-9
pubmed: 17535798
Nat Mach Intell. 2021 Jul;3:601-609
pubmed: 34368623
J Food Prot. 2016 Dec;79(12):2078-2085
pubmed: 28221953
Diagn Microbiol Infect Dis. 2020 Dec;98(4):115177
pubmed: 32966946
J Antimicrob Chemother. 2015 Sep;70(9):2440-6
pubmed: 26093376
Appl Environ Microbiol. 2000 Mar;66(3):1205-8
pubmed: 10698793
Pediatr Nephrol. 2013 Nov;28(11):2097-105
pubmed: 23288350
Sci Rep. 2017 Aug 1;7(1):7011
pubmed: 28765569
Bioinformatics. 2009 Jun 1;25(11):1422-3
pubmed: 19304878
J Food Prot. 2013 May;76(5):871-3
pubmed: 23643131
Appl Environ Microbiol. 2011 Sep;77(18):6699-702
pubmed: 21803918
J Infect Dis. 2002 Jan 1;185(1):74-84
pubmed: 11756984
Pediatr Nephrol. 2020 Oct;35(10):1997-2001
pubmed: 32734345
Int J Med Microbiol. 2009 Jun;299(5):343-53
pubmed: 19157976
Front Microbiol. 2021 Mar 18;12:640945
pubmed: 33868197
Microbiol Spectr. 2014 Oct;2(5):
pubmed: 26104359
iScience. 2019 Aug 30;18:37-41
pubmed: 31472161
Int J Med Microbiol. 2011 Mar;301(3):181-91
pubmed: 20728406
Nucleic Acids Res. 2011 Jul;39(Web Server issue):W347-52
pubmed: 21672955
J Clin Microbiol. 2014 Apr;52(4):1301-3
pubmed: 24501025
Pathogens. 2021 Mar 29;10(4):
pubmed: 33805526
Bioinformatics. 2014 May 1;30(9):1312-3
pubmed: 24451623
Toxins (Basel). 2021 Jun 22;13(7):
pubmed: 34206386
J Clin Microbiol. 2014 Jul;52(7):2346-51
pubmed: 24759708
Bioinformatics. 2012 Apr 15;28(8):1166-7
pubmed: 22368248
Proc Natl Acad Sci U S A. 1995 Feb 28;92(5):1664-8
pubmed: 7878036
Nat Rev Microbiol. 2021 Jan;19(1):37-54
pubmed: 32826992
Mol Biol Evol. 2016 Jun;33(6):1635-8
pubmed: 26921390
PeerJ. 2015 Feb 17;3:e739
pubmed: 25737808
Infect Immun. 1983 May;40(2):675-83
pubmed: 6341244
Infect Immun. 1977 Dec;18(3):775-9
pubmed: 338490
Genome Res. 2017 May;27(5):737-746
pubmed: 28100585
Infect Immun. 2015 Oct 19;84(1):149-61
pubmed: 26483409
Bioinformatics. 2016 Jul 15;32(14):2103-10
pubmed: 27153593
PLoS Comput Biol. 2017 Jun 8;13(6):e1005595
pubmed: 28594827
Sci Rep. 2018 Apr 30;8(1):6756
pubmed: 29712985
Food Microbiol. 2019 Sep;82:474-481
pubmed: 31027808
J Food Prot. 2016 Oct;79(10):1656-1662
pubmed: 28221838
Emerg Infect Dis. 2012 Apr;18(4):577-81
pubmed: 22469631
BMC Genomics. 2021 May 19;22(1):366
pubmed: 34011288
Microorganisms. 2021 Nov 17;9(11):
pubmed: 34835499
Emerg Infect Dis. 2017 Oct;23(10):1686-1689
pubmed: 28930030
Microbiol Spectr. 2014 Aug;2(4):EHEC-0024-2013
pubmed: 25530917
Foodborne Pathog Dis. 2011 Mar;8(3):421-6
pubmed: 21166561
Microbiology (Reading). 2015 Mar;161(Pt 3):451-62
pubmed: 25479836
PLoS Negl Trop Dis. 2020 Sep 8;14(9):e0008613
pubmed: 32898134
Food Microbiol. 2021 Oct;99:103821
pubmed: 34119106
Emerg Infect Dis. 2015 Jan;21(1):168-9
pubmed: 25532030
J Clin Microbiol. 2012 Sep;50(9):2951-63
pubmed: 22760050
Infect Immun. 1986 Jul;53(1):135-40
pubmed: 3522426
Nucleic Acids Res. 2016 Jul 8;44(W1):W16-21
pubmed: 27141966
J Comput Biol. 2012 May;19(5):455-77
pubmed: 22506599
Euro Surveill. 2014 May 01;19(17):26-32
pubmed: 24821123
Microbiology (Reading). 2018 Apr;164(4):509-516
pubmed: 29533744
BMC Microbiol. 2014 Jan 06;14:5
pubmed: 24393167
Emerg Infect Dis. 2000 Sep-Oct;6(5):458-65
pubmed: 10998375
PLoS One. 2015 Mar 19;10(3):e0120353
pubmed: 25789994
Cold Spring Harb Protoc. 2016 Dec 1;2016(12):
pubmed: 27934690
J Food Prot. 2019 May;82(5):724-767
pubmed: 30969806
BMC Bioinformatics. 2004 Aug 19;5:113
pubmed: 15318951
Int J Med Microbiol. 2020 Jan;310(1):151377
pubmed: 31757694
Microb Pathog. 2009 Dec;47(6):289-98
pubmed: 19761828
BMC Genomics. 2019 Apr 5;20(1):271
pubmed: 30953471
Toxicon. 2018 Jun 15;148:149-154
pubmed: 29698757
PLoS One. 2014 Nov 19;9(11):e112963
pubmed: 25409509
Genome Announc. 2018 May 10;6(19):
pubmed: 29748405
J Food Prot. 2012 Feb;75(2):408-18
pubmed: 22289607
Int J Med Microbiol. 2018 Oct;308(7):933-939
pubmed: 30042042
Int J Food Microbiol. 2021 Jun 2;347:109197
pubmed: 33895597
PLoS One. 2018 Jul 2;13(7):e0199968
pubmed: 29965972
Emerg Infect Dis. 2016 Dec;22(12):2078-2086
pubmed: 27584691
BMC Genomics. 2014 Aug 04;15:645
pubmed: 25087472
J Clin Microbiol. 2014 May;52(5):1501-10
pubmed: 24574290
Front Cell Infect Microbiol. 2020 Jun 04;10:273
pubmed: 32582571
Microb Pathog. 1987 Feb;2(2):147-53
pubmed: 3333796
mBio. 2012 Dec 26;4(1):e00416-12
pubmed: 23269826
Bioinformatics. 2014 Jul 15;30(14):2068-9
pubmed: 24642063
BMC Bioinformatics. 2009 Dec 15;10:421
pubmed: 20003500
Clin Infect Dis. 2013 Jan;56(1):114-6
pubmed: 23042969
Microbiol Spectr. 2014 Jun;2(3):
pubmed: 26103973
PLoS One. 2021 Sep 3;16(9):e0257168
pubmed: 34478476
J Clin Microbiol. 1996 Jul;34(7):1622-7
pubmed: 8784557

Auteurs

Alexander Gill (A)

Health Canadagrid.57544.37, Bureau of Microbial Hazards, Ottawa, Ontario, Canada.
ORCID: 0000-0003-2380-2148

Forest Dussault (F)

Health Canadagrid.57544.37, Bureau of Food Surveillance and Science Integration, Ottawa, Ontario, Canada.

Tanis McMahon (T)

Health Canadagrid.57544.37, Bureau of Microbial Hazards, Ottawa, Ontario, Canada.

Nicholas Petronella (N)

Health Canadagrid.57544.37, Bureau of Food Surveillance and Science Integration, Ottawa, Ontario, Canada.

Xiong Wang (X)

Public Health Laboratory, Minnesota Department of Health, St. Paul, Minnesota, USA.

Elizabeth Cebelinski (E)

Public Health Laboratory, Minnesota Department of Health, St. Paul, Minnesota, USA.

Flemming Scheutz (F)

The International Escherichia and Klebsiella Centre, Statens Serum Institut, Copenhagen, Denmark.
ORCID: 0000-0002-3931-4846

Kelly Weedmark (K)

Health Canadagrid.57544.37, Bureau of Microbial Hazards, Ottawa, Ontario, Canada.

Burton Blais (B)

Canadian Food Inspection Agencygrid.418040.9, Ottawa (Carling) Laboratory, Ottawa, Ontario, Canada.

Catherine Carrillo (C)

Canadian Food Inspection Agencygrid.418040.9, Ottawa (Carling) Laboratory, Ottawa, Ontario, Canada.

Articles similaires

Comparative genomic analysis and characterization of novel high-quality draft genomes from the coal metagenome.

Arunmozhi Bharathi Achudhan, Lilly M Saleena
1.00
Coal Metagenome Phylogeny Bacteria Genome, Bacterial

From cactus to crop: genomic insights of a beneficial and non-pathogenic Curtobacterium flaccumfaciens strain and the evolution of its pathosystem.

Dilson Fagundes Ribeiro, Jéssica Pereira de Matos, Lorrana Cachuite Mendes Rocha et al.
1.00
Genome, Bacterial Virulence Phylogeny Genomics Plant Diseases

Bioinspired gelated cell sheet-supported lactobacillus biofilm for aerobic vaginitis diagnosis and treatment.

Yueyue Gui, Qingfei Sun, Kexin Li et al.
1.00
Female Biofilms Animals Lactobacillus Mice

Polyphasic identification of Vibrio species from aquatic sources using mass spectrometry, housekeeping gene sequencing and whole genome analysis.

Anna Luiza Bauer Canellas, Adriana Rocha Faria, Gabriel Rodrigues Dias et al.
1.00
Vibrio Whole Genome Sequencing Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization Genome, Bacterial Water Microbiology

Classifications MeSH

questionsmedicales.fr › Régions géographiques › Amériques › Amérique du Nord › Canada › Characterization of Atypical Shiga Toxin Gene...
questionsmedicales.fr › Infection › Infections bactériennes et mycoses › Infections bactériennes › Infections bactériennes à Gram négatif › Infections à Enterobacteriaceae › Infections à Escherichia coli › Characterization of Atypical Shiga Toxin Gene...
questionsmedicales.fr › Acides aminés, peptides et protéines › Protéines › Protéines bactériennes › Protéines Escherichia coli › Characterization of Atypical Shiga Toxin Gene...
questionsmedicales.fr › Phénomènes génétiques › Structures génétiques › Génome › Génome microbien › Génome bactérien › Characterization of Atypical Shiga Toxin Gene...
questionsmedicales.fr › Facteurs biologiques › Toxines biologiques › Entérotoxines › Shiga-toxines › Shiga-toxine › Characterization of Atypical Shiga Toxin Gene...
questionsmedicales.fr › Bactéries › Proteobacteria › Gammaproteobacteria › Enterobacteriaceae › Escherichia › Escherichia coli › Escherichia coli producteur de Shiga-toxine › Characterization of Atypical Shiga Toxin Gene...