Olexandr Dybkov

Affiliations

Cellular Biochemistry, Max Planck Institute for Biophysical Chemistry, Am Fassberg 11, Göttingen, Germany.

ORCID: 0000-0001-6005-7242

Publications (17)

Mapping protein interactions in the active TOM-TIM23 supercomplex.

Nature communications

Avec: Ridhima Gomkale , Andreas Linden , Piotr Neumann , Alexander Benjamin Schendzielorz , Stefan Stoldt , Olexandr Dybkov , Markus Kilisch , Christian Schulz , Luis Daniel Cruz-Zaragoza , Blanche Schwappach , Ralf Ficner , Stefan Jakobs , Henning Urlaub , Peter Rehling

Autoinhibition Mechanism of the Ubiquitin-Conjugating Enzyme UBE2S by Autoubiquitination.

Structure (London, England : 1993)

Avec: Anna K L Liess , Alena Kucerova , Kristian Schweimer , Lu Yu , Theodoros I Roumeliotis , Mathias Diebold , Olexandr Dybkov , Christoph Sotriffer , Henning Urlaub , Jyoti S Choudhary , Jörg Mansfeld , Sonja Lorenz

Dimerization regulates the human APC/C-associated ubiquitin-conjugating enzyme UBE2S.

Science signaling

Avec: Anna K L Liess , Alena Kucerova , Kristian Schweimer , Dörte Schlesinger , Olexandr Dybkov , Henning Urlaub , Jörg Mansfeld , Sonja Lorenz

Structural basis of Integrator-dependent RNA polymerase II termination.

Nature

Avec: Isaac Fianu , Moritz Ochmann , James L Walshe , Olexandr Dybkov , Joseph Neos Cruz , Henning Urlaub , Patrick Cramer

Mechanism of protein-guided folding of the active site U2/U6 RNA during spliceosome activation.

Science (New York, N.Y.)

Avec: Cole Townsend , Majety N Leelaram , Dmitry E Agafonov , Olexandr Dybkov , Cindy L Will , Karl Bertram , Henning Urlaub , Berthold Kastner , Holger Stark , Reinhard Lührmann

Structural insights into how Prp5 proofreads the pre-mRNA branch site.

Nature

Avec: Zhenwei Zhang , Norbert Rigo , Olexandr Dybkov , Jean-Baptiste Fourmann , Cindy L Will , Vinay Kumar , Henning Urlaub , Holger Stark , Reinhard Lührmann

Structural mechanisms of autoinhibition and substrate recognition by the ubiquitin ligase HACE1.

Nature structural & molecular biology

Avec: Jonas Düring , Madita Wolter , Julia J Toplak , Camilo Torres , Olexandr Dybkov , Thornton J Fokkens , Katherine E Bohnsack , Henning Urlaub , Wieland Steinchen , Christian Dienemann , Sonja Lorenz

Cryo-EM analyses of dimerized spliceosomes provide new insights into the functions of B complex proteins.

The EMBO journal

Avec: Zhenwei Zhang , Vinay Kumar , Olexandr Dybkov , Cindy L Will , Henning Urlaub , Holger Stark , Reinhard Lührmann

OpenPepXL: An Open-Source Tool for Sensitive Identification of Cross-Linked Peptides in XL-MS.

Molecular & cellular proteomics : MCP

Avec: Eugen Netz , Tjeerd M H Dijkstra , Timo Sachsenberg , Lukas Zimmermann , Mathias Walzer , Thomas Monecke , Ralf Ficner , Olexandr Dybkov , Henning Urlaub , Oliver Kohlbacher

Structure of the transcribing RNA polymerase II-Elongin complex.

Nature structural & molecular biology

Avec: Ying Chen , Goran Kokic , Christian Dienemann , Olexandr Dybkov , Henning Urlaub , Patrick Cramer

Regulation of 3' splice site selection after step 1 of splicing by spliceosomal C* proteins.

Science advances

Avec: Olexandr Dybkov , Marco Preußner , Leyla El Ayoubi , Vivi-Yun Feng , Caroline Harnisch , Kilian Merz , Paula Leupold , Peter Yudichev , Dmitry E Agafonov , Cindy L Will , Cyrille Girard , Christian Dienemann , Henning Urlaub , Berthold Kastner , Florian Heyd , Reinhard Lührmann

Structural insights into the cross-exon to cross-intron spliceosome switch.

Nature

Avec: Zhenwei Zhang , Vinay Kumar , Olexandr Dybkov , Cindy L Will , Jiayun Zhong , Sebastian E J Ludwig , Henning Urlaub , Berthold Kastner , Holger Stark , Reinhard Lührmann

Structural Insights into the Roles of Metazoan-Specific Splicing Factors in the Human Step 1 Spliceosome.

Molecular cell

Avec: Karl Bertram , Leyla El Ayoubi , Olexandr Dybkov , Dmitry E Agafonov , Cindy L Will , Klaus Hartmuth , Henning Urlaub , Berthold Kastner , Holger Stark , Reinhard Lührmann

Molecular architecture of the human 17S U2 snRNP.

Nature

Avec: Zhenwei Zhang , Cindy L Will , Karl Bertram , Olexandr Dybkov , Klaus Hartmuth , Dmitry E Agafonov , Romina Hofele , Henning Urlaub , Berthold Kastner , Reinhard Lührmann , Holger Stark

Structural basis of Integrator-mediated transcription regulation.

Science (New York, N.Y.)

Avec: Isaac Fianu , Ying Chen , Christian Dienemann , Olexandr Dybkov , Andreas Linden , Henning Urlaub , Patrick Cramer

Phosphorylation of ELYS promotes its interaction with VAPB at decondensing chromosomes during mitosis.

EMBO reports

Avec: Christina James , Ulrike Möller , Christiane Spillner , Sabine König , Olexandr Dybkov , Henning Urlaub , Christof Lenz , Ralph H Kehlenbach

RNA helicase IGHMBP2 regulates THO complex to ensure cellular mRNA homeostasis.

Cell reports

Avec: Archana Bairavasundaram Prusty , Anja Hirmer , Julieth Andrea Sierra-Delgado , Hannes Huber , Ulf-Peter Guenther , Andreas Schlosser , Olexandr Dybkov , Ezgi Yildirim , Henning Urlaub , Kathrin C Meyer , Sibylle Jablonka , Florian Erhard , Utz Fischer

Réseau de co-auteurs

Henning Urlaub 17 collaborations

Cindy L Will 7 collaborations

Reinhard Lührmann 7 collaborations

Holger Stark 6 collaborations

Berthold Kastner 5 collaborations

Dmitry E Agafonov 4 collaborations

Zhenwei Zhang 4 collaborations

Christian Dienemann 4 collaborations

Sonja Lorenz 3 collaborations

Patrick Cramer 3 collaborations

Karl Bertram 3 collaborations

Vinay Kumar 3 collaborations

Andreas Linden 2 collaborations

Ralf Ficner 2 collaborations

Anna K L Liess 2 collaborations

Alena Kucerova 2 collaborations

Kristian Schweimer 2 collaborations

Jörg Mansfeld 2 collaborations

Isaac Fianu 2 collaborations

Ying Chen 2 collaborations

Leyla El Ayoubi 2 collaborations

Klaus Hartmuth 2 collaborations

Ridhima Gomkale 1 collaboration

Piotr Neumann 1 collaboration

Alexander Benjamin Schendzielorz 1 collaboration

Stefan Stoldt 1 collaboration

Markus Kilisch 1 collaboration

Christian Schulz 1 collaboration

Luis Daniel Cruz-Zaragoza 1 collaboration

Blanche Schwappach 1 collaboration

Stefan Jakobs 1 collaboration

Peter Rehling 1 collaboration

Lu Yu 1 collaboration

Theodoros I Roumeliotis 1 collaboration

Mathias Diebold 1 collaboration

Christoph Sotriffer 1 collaboration

Jyoti S Choudhary 1 collaboration

Dörte Schlesinger 1 collaboration

Moritz Ochmann 1 collaboration

James L Walshe 1 collaboration

Joseph Neos Cruz 1 collaboration

Cole Townsend 1 collaboration

Majety N Leelaram 1 collaboration

Norbert Rigo 1 collaboration

Jean-Baptiste Fourmann 1 collaboration

Jonas Düring 1 collaboration

Madita Wolter 1 collaboration

Julia J Toplak 1 collaboration

Camilo Torres 1 collaboration

Thornton J Fokkens 1 collaboration

Katherine E Bohnsack 1 collaboration

Wieland Steinchen 1 collaboration

Eugen Netz 1 collaboration

Tjeerd M H Dijkstra 1 collaboration

Timo Sachsenberg 1 collaboration

Lukas Zimmermann 1 collaboration

Mathias Walzer 1 collaboration

Thomas Monecke 1 collaboration

Oliver Kohlbacher 1 collaboration

Goran Kokic 1 collaboration

Marco Preußner 1 collaboration

Vivi-Yun Feng 1 collaboration

Caroline Harnisch 1 collaboration

Kilian Merz 1 collaboration

Paula Leupold 1 collaboration

Peter Yudichev 1 collaboration

Cyrille Girard 1 collaboration

Florian Heyd 1 collaboration

Jiayun Zhong 1 collaboration

Sebastian E J Ludwig 1 collaboration

Romina Hofele 1 collaboration

Christina James 1 collaboration

Ulrike Möller 1 collaboration

Christiane Spillner 1 collaboration

Sabine König 1 collaboration

Christof Lenz 1 collaboration

Ralph H Kehlenbach 1 collaboration

Archana Bairavasundaram Prusty 1 collaboration

Anja Hirmer 1 collaboration

Julieth Andrea Sierra-Delgado 1 collaboration

Hannes Huber 1 collaboration

Ulf-Peter Guenther 1 collaboration

Andreas Schlosser 1 collaboration

Ezgi Yildirim 1 collaboration

Kathrin C Meyer 1 collaboration

Sibylle Jablonka 1 collaboration

Florian Erhard 1 collaboration

Utz Fischer 1 collaboration