DNA affinity purification sequencing and transcriptional profiling reveal new aspects of nitrogen regulation in a filamentous fungus.
Catabolite Repression
/ genetics
DNA-Binding Proteins
/ metabolism
Fungal Proteins
/ metabolism
Gene Expression Regulation, Fungal
Gene Regulatory Networks
Metabolic Networks and Pathways
/ genetics
Neurospora crassa
/ physiology
Nitrogen
/ metabolism
RNA-Seq
Trans-Activators
Transcription Factors
/ metabolism
DAPseq
RNAseq
nitrogen utilization
nutrient sensing
transcriptional networks
Journal
Proceedings of the National Academy of Sciences of the United States of America
ISSN: 1091-6490
Titre abrégé: Proc Natl Acad Sci U S A
Pays: United States
ID NLM: 7505876
Informations de publication
Date de publication:
30 03 2021
30 03 2021
Historique:
entrez:
23
3
2021
pubmed:
24
3
2021
medline:
25
2
2023
Statut:
ppublish
Résumé
Sensing available nutrients and efficiently utilizing them is a challenge common to all organisms. The model filamentous fungus
Identifiants
pubmed: 33753477
pii: 2009501118
doi: 10.1073/pnas.2009501118
pmc: PMC8020665
pii:
doi:
Substances chimiques
DNA-Binding Proteins
0
Fungal Proteins
0
NIT2 protein, Neurospora crassa
0
Trans-Activators
0
Transcription Factors
0
NIT-4 protein, Neurospora crassa
144590-62-5
Nitrogen
N762921K75
Types de publication
Journal Article
Research Support, N.I.H., Extramural
Research Support, U.S. Gov't, Non-P.H.S.
Langues
eng
Sous-ensembles de citation
IM
Subventions
Organisme : NIGMS NIH HHS
ID : T32 GM007127
Pays : United States
Déclaration de conflit d'intérêts
The authors declare no competing interest.
Références
Adv Microb Physiol. 1985;26:1-88
pubmed: 2869649
Microbiol Mol Biol Rev. 1997 Mar;61(1):17-32
pubmed: 9106362
Cell. 2014 Sep 11;158(6):1431-1443
pubmed: 25215497
Science. 2000 Dec 22;290(5500):2306-9
pubmed: 11125145
Proc Natl Acad Sci U S A. 2006 Jul 5;103(27):10352-10357
pubmed: 16801547
Biochemistry. 1995 Jul 11;34(27):8861-8
pubmed: 7612627
Trends Plant Sci. 2006 Jan;11(1):33-9
pubmed: 16356755
Nucleic Acids Res. 2009 Jul;37(Web Server issue):W202-8
pubmed: 19458158
Mol Gen Genet. 1982;186(2):259-62
pubmed: 6213838
J Biosci. 2010 Mar;35(1):119-26
pubmed: 20413916
Gene. 1986;46(2-3):291-5
pubmed: 2879771
Mol Gen Genet. 1980;179(1):25-32
pubmed: 6109228
Biochem Genet. 1978 Apr;16(3-4):343-54
pubmed: 150270
Bioinformatics. 2011 Apr 1;27(7):1017-8
pubmed: 21330290
Gene. 1983 Dec;26(2-3):253-60
pubmed: 6231215
Mol Cell Biol. 1986 Jul;6(7):2638-45
pubmed: 3537723
mBio. 2015 Oct 13;6(5):e01452-15
pubmed: 26463163
J Bacteriol. 1969 Oct;100(1):383-9
pubmed: 5344102
J Bacteriol. 1988 Feb;170(2):657-61
pubmed: 2962990
Plant Cell Physiol. 2014 Jul;55(7):1311-24
pubmed: 24904028
Mol Cell Biol. 1993 Jul;13(7):4011-22
pubmed: 8321208
Genetics. 1987 Nov;117(3):429-35
pubmed: 3121434
Mol Microbiol. 1997 Nov;26(4):721-9
pubmed: 9427402
Mol Cell Biol. 1999 May;19(5):3360-71
pubmed: 10207060
J Bacteriol. 1995 Jul;177(14):4190-3
pubmed: 7608102
Proc Natl Acad Sci U S A. 2017 Oct 10;114(41):E8665-E8674
pubmed: 28973881
Nat Protoc. 2012 Mar 01;7(3):562-78
pubmed: 22383036
PLoS Pathog. 2015 Mar 26;11(3):e1004790
pubmed: 25812137
PLoS One. 2011;6(10):e26604
pubmed: 22046314
Proc Natl Acad Sci U S A. 2012 May 8;109(19):7397-402
pubmed: 22532664
Mol Gen Genet. 1975 Aug 5;139(1):39-55
pubmed: 126363
J Biol Chem. 1962 Jan;237:138-42
pubmed: 14481396
Fungal Genet Biol. 2001 Jul;33(2):127-35
pubmed: 11456465
Genome Res. 2009 Sep;19(9):1639-45
pubmed: 19541911
Fungal Genet Biol. 2002 Nov;37(2):190-6
pubmed: 12409103
Biochemistry. 1994 Jan 18;33(2):576-82
pubmed: 8286388
Proc Natl Acad Sci U S A. 2020 Mar 17;117(11):6003-6013
pubmed: 32111691
Appl Environ Microbiol. 2008 Apr;74(8):2259-66
pubmed: 18281432
Mol Microbiol. 2003 May;48(3):639-55
pubmed: 12694611
Nucleic Acids Res. 1993 Aug 25;21(17):3989-96
pubmed: 8396761
Genetics. 2017 Feb;205(2):633-655
pubmed: 28007891
Mol Cell Biol. 1991 Nov;11(11):5735-45
pubmed: 1840634
Mol Gen Genet. 1990 Jun;222(1):120-8
pubmed: 2146484
J Bacteriol. 1976 Sep;127(3):1265-9
pubmed: 134026
Cell. 2016 May 19;165(5):1280-1292
pubmed: 27203113
J Bacteriol. 1975 Feb;121(2):648-55
pubmed: 122971
Mol Microbiol. 2013 Jun;88(6):1120-34
pubmed: 23651256
J Bacteriol. 1979 Mar;137(3):1333-9
pubmed: 35517
Biotechnol Biofuels. 2017 Sep 21;10:225
pubmed: 28947916
J Bacteriol. 1995 Nov;177(21):6093-9
pubmed: 7592372
J Bacteriol. 1980 Nov;144(2):542-51
pubmed: 6107286
Mol Plant Pathol. 2006 Nov;7(6):485-97
pubmed: 20507463
J Bacteriol. 1991 Aug;173(16):4977-82
pubmed: 1860815
Proc Natl Acad Sci U S A. 1990 Jul;87(14):5331-5
pubmed: 2142530
Eukaryot Cell. 2005 Oct;4(10):1646-53
pubmed: 16215172
Mol Gen Genet. 1994 Nov 15;245(4):512-6
pubmed: 7808401
Nucleic Acids Res. 2000 Jan 1;28(1):27-30
pubmed: 10592173
Curr Genet. 2004 Oct;46(4):213-27
pubmed: 15378267
mBio. 2019 Jul 2;10(4):
pubmed: 31266859
J Bacteriol. 1989 Jul;171(7):4067-70
pubmed: 2567729
Bioinformatics. 2015 Feb 1;31(3):445-6
pubmed: 25294921
Mol Microbiol. 1998 Apr;28(2):355-70
pubmed: 9622360
Med Mycol. 2005 May;43 Suppl 1:S31-40
pubmed: 16110790
Mol Microbiol. 1989 Apr;3(4):553-9
pubmed: 2668692