Alexandre Alanio

Affiliations

Molecular Mycology Unit, Institut Pasteur, CNRS, UMR2000, Paris, France.
Laboratoire de Parasitologie-Mycologie, Groupe Hospitalier Saint-Louis-Lariboisière-Fernand-Widal, Hôpital Saint-Louis, Assistance Publique-Hôpitaux de Paris (AP-HP), Paris, France.
Sorbonne Paris Cité, Université Paris Diderot, Paris, France.

Publications (75)

Outcome and characteristics of invasive fungal infections in critically ill burn patients: A multicenter retrospective study.

Mycoses

Avec: Véronique Maurel , Blandine Denis , Matthieu Camby , Mathieu Jeanne , Aline Cornesse , Boris Glavnik , Alexandre Alanio , Anne-Françoise Rousseau , Ronan Lefloch , Marie Lagrange-Xelot , Julien Textoris , Sandrine Wiramus , Christian de Tymowski , Matthieu Legrand

Development and validation of the European QUALity (EQUAL) score for mucormycosis management in haematology.

The Journal of antimicrobial chemotherapy

Avec: Philipp Koehler , Sibylle C Mellinghoff , Katrien Lagrou , Alexandre Alanio , Dorothee Arenz , Martin Hoenigl , Felix C Koehler , Cornelia Lass-Flörl , Jacques F Meis , Malcolm Richardson , Oliver A Cornely

COVID-19-associated mixed mold infection: A case report of aspergillosis and mucormycosis and a literature review.

Journal de mycologie medicale

Avec: Yasmine Benhadid-Brahmi , Samia Hamane , Benjamin Soyer , Alexandre Mebazaa , Alexandre Alanio , Benjamin Chousterman , Stéphane Bretagne , Sarah Dellière

Imported leishmaniasis in travelers: a 7-year retrospective from a Parisian hospital in France.

BMC infectious diseases

Avec: Nesrine Aissaoui , Samia Hamane , Maud Gits-Muselli , Antoine Petit , Mazouz Benderdouche , Blandine Denis , Alexandre Alanio , Sarah Dellière , Martine Bagot , Stéphane Bretagne

Combination of Mycological Criteria: a Better Surrogate to Identify COVID-19-Associated Pulmonary Aspergillosis Patients and Evaluate Prognosis?

Journal of clinical microbiology

Avec: Sarah Dellière , Emmanuel Dudoignon , Sébastian Voicu , Magalie Collet , Sofiane Fodil , Benoit Plaud , Benjamin Chousterman , Stéphane Bretagne , Elie Azoulay , Alexandre Mebazaa , François Dépret , Bruno Mégarbane , Alexandre Alanio

Hepatosplenic Candidiasis in Patients With Hematological Malignancies: A 13-Year Retrospective Cohort Study.

Open forum infectious diseases

Avec: Inès Boussen , Quentin Lisan , Emmanuel Raffoux , Roberta Di Blasi , Nicolas Boissel , Eric Oksenhendler , Lionel Adès , Aliénor Xhaard , Stéphane Bretagne , Alexandre Alanio , Jean-Michel Molina , Blandine Denis

The current state of clinical mycology in Africa: a European Confederation of Medical Mycology and International Society for Human and Animal Mycology survey.

The Lancet. Microbe

Avec: Cândida Driemeyer , Diego R Falci , Rita O Oladele , Felix Bongomin , Bright K Ocansey , Nelesh P Govender , Martin Hoenigl , Jean Pierre Gangneux , Cornelia Lass-Flörl , Oliver A Cornely , Alexandre Alanio , Jesus Guinea , C Orla Morrissey , Riina Rautemaa-Richardson , Arunaloke Chakrabarti , Jacques F Meis , Caroline Bruns , Jannik Stemler , Alessandro C Pasqualotto

Multiple colony antifungal susceptibility testing detects polyresistance in clinical Candida cultures: a European Confederation of Medical Mycology excellence centers study.

Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases

Avec: Miriam A Knoll , Nina Lackner , Hanno Ulmer , Eldina Samardzic , Joerg Steinmann , Robert Krause , Hedda L Verhasselt , Peter-Michael Rath , Frieder Fuchs , Philipp Koehler , Blandine Denis , Samia Hamane , Alexandre Alanio , Cornelia Lass-Flörl

Analytical Performance of the Commercial MucorGenius

Journal of fungi (Basel, Switzerland)

Avec: Théo Ghelfenstein-Ferreira , Laura Verdurme , Alexandre Alanio

Development and validation of a new quantitative reverse transcription PCR assay for the diagnosis of human sporotrichosis.

Medical mycology

Avec: Priscila Marques de Macedo , Aude Sturny-Leclère , Dayvison Francis Saraiva Freitas , Theo Ghelfenstein-Ferreira , Maria Clara Gutierrez-Galhardo , Marcos de Abreu Almeida , Anderson Messias Rodrigues , Thierry Pautet , Samia Hamane , Rodrigo Almeida-Paes , Rosely Maria Zancopé-Oliveira , Alexandre Alanio

Development and validation of quantitative PCR assays for HIV-associated cryptococcal meningitis in sub-Saharan Africa: a diagnostic accuracy study.

The Lancet. Microbe

Avec: Tshepiso Mbangiwa , Aude Sturny-Leclère , Kwana Lechiile , Cheusisime Kajanga , Timothée Boyer-Chammard , Jennifer C Hoving , Tshepo Leeme , Melanie Moyo , Nabila Youssouf , David S Lawrence , Henry Mwandumba , Mosepele Mosepele , Thomas S Harrison , Joseph N Jarvis , Olivier Lortholary , Alexandre Alanio , Auteur inconnu

Polymerase Chain Reaction on Respiratory Tract Specimens of Immunocompromised Patients to Diagnose Pneumocystis Pneumonia: A Systematic Review and Meta-analysis.

Clinical infectious diseases : an official publication of the Infectious Diseases Society of America

Avec: Lottie Brown , Riina Rautemaa-Richardson , Carlo Mengoli , Alexandre Alanio , Rosemary A Barnes , Stéphane Bretagne , Sharon C A Chen , Catherine Cordonnier , J Peter Donnelly , Werner J Heinz , Brian Jones , Lena Klingspor , Juergen Loeffler , Thomas R Rogers , Eleanor Rowbotham , P Lewis White , Mario Cruciani

Evaluation of an in-house Pan-Malassezia quantitative PCR in human clinical samples.

Medical mycology

Avec: Victor Euzen , Théo Ghelfenstein-Ferreira , Yasmine Benhadid-Brahmi , Alexandra Teboul , Sarah Dellière , Mazouz Benderdouche , Véronique Charlier , Marie Desnos-Ollivier , Samia Hamane , Alexandre Alanio

Increased sensitivity of a new commercial reverse transcriptase-quantitative PCR for the detection of Pneumocystis jirovecii in respiratory specimens.

Medical mycology

Avec: Sarah Dellière , Samia Hamane , Nesrine Aissaoui , Maud Gits-Muselli , Stéphane Bretagne , Alexandre Alanio

Global guideline for the diagnosis and management of mucormycosis: an initiative of the European Confederation of Medical Mycology in cooperation with the Mycoses Study Group Education and Research Consortium.

The Lancet. Infectious diseases

Avec: Oliver A Cornely , Ana Alastruey-Izquierdo , Dorothee Arenz , Sharon C A Chen , Eric Dannaoui , Bruno Hochhegger , Martin Hoenigl , Henrik E Jensen , Katrien Lagrou , Russell E Lewis , Sibylle C Mellinghoff , Mervyn Mer , Zoi D Pana , Danila Seidel , Donald C Sheppard , Roger Wahba , Murat Akova , Alexandre Alanio , Abdullah M S Al-Hatmi , Sevtap Arikan-Akdagli , Hamid Badali , Ronen Ben-Ami , Alexandro Bonifaz , Stéphane Bretagne , Elio Castagnola , Methee Chayakulkeeree , Arnaldo L Colombo , Dora E Corzo-León , Lubos Drgona , Andreas H Groll , Jesus Guinea , Claus-Peter Heussel , Ashraf S Ibrahim , Souha S Kanj , Nikolay Klimko , Michaela Lackner , Frederic Lamoth , Fanny Lanternier , Cornelia Lass-Floerl , Dong-Gun Lee , Thomas Lehrnbecher , Badre E Lmimouni , Mihai Mares , Georg Maschmeyer , Jacques F Meis , Joseph Meletiadis , C Orla Morrissey , Marcio Nucci , Rita Oladele , Livio Pagano , Alessandro Pasqualotto , Atul Patel , Zdenek Racil , Malcolm Richardson , Emmanuel Roilides , Markus Ruhnke , Seyedmojtaba Seyedmousavi , Neeraj Sidharthan , Nina Singh , János Sinko , Anna Skiada , Monica Slavin , Rajeev Soman , Brad Spellberg , William Steinbach , Ban Hock Tan , Andrew J Ullmann , Jörg J Vehreschild , Maria J G T Vehreschild , Thomas J Walsh , P Lewis White , Nathan P Wiederhold , Theoklis Zaoutis , Arunaloke Chakrabarti , Auteur inconnu

Anti-fungal activity of a novel triazole, PC1244, against emerging azole-resistant Aspergillus fumigatus and other species of Aspergillus.

The Journal of antimicrobial chemotherapy

Avec: Thomas Colley , Cheshta Sharma , Alexandre Alanio , Genki Kimura , Leah Daly , Takahiro Nakaoki , Yuki Nishimoto , Stéphane Bretagne , Yasuo Kizawa , Pete Strong , Garth Rapeport , Kazuhiro Ito , Jacques F Meis , Anuradha Chowdhary

Evaluation of Mass Spectrometry-Based Detection of Panfungal Serum Disaccharide for Diagnosis of Invasive Fungal Infections: Results from a Collaborative Study Involving Six European Clinical Centers.

Journal of clinical microbiology

Avec: Marjorie Cornu , Boualem Sendid , Alexandre Mery , Nadine François , Malgorzata Mikulska , Valérie Letscher-Bru , Elena De Carolis , Lauro Damonti , Marie Titecat , Pierre-Yves Bochud , Alexandre Alanio , Maurizio Sanguinetti , Claudio Viscoli , Raoul Herbrecht , Yann Guerardel , Daniel Poulain

Tracking a Global Threat: a New Genotyping Method for Candida auris.

mBio

Avec: Christina A Cuomo , Alexandre Alanio

Interlaboratory evaluation of Mucorales PCR assays for testing serum specimens: A study by the fungal PCR Initiative and the Modimucor study group.

Medical mycology

Avec: S Rocchi , E Scherer , C Mengoli , A Alanio , F Botterel , M E Bougnoux , S Bretagne , M Cogliati , M Cornu , F Dalle , C Damiani , J Denis , S Fuchs , M Gits-Muselli , F Hagen , C Halliday , R Hare , X Iriart , C Klaassen , M Lackner , M Lengerova , V Letscher-Bru , F Morio , C Nourrisson , W Posch , B Sendid , J Springer , B Willinger , P L White , R A Barnes , M Cruciani , J P Donnelly , J Loeffler , L Millon

COVID-19-Associated Pulmonary Aspergillosis, Fungemia, and Pneumocystosis in the Intensive Care Unit: a Retrospective Multicenter Observational Cohort during the First French Pandemic Wave.

Microbiology spectrum

Avec: Stéphane Bretagne , Karine Sitbon , Françoise Botterel , Sarah Dellière , Valérie Letscher-Bru , Taieb Chouaki , Anne-Pauline Bellanger , Christine Bonnal , Arnault Fekkar , Florence Persat , Damien Costa , Nathalie Bourgeois , Frédéric Dalle , Florian Lussac-Sorton , André Paugam , Sophie Cassaing , Lilia Hasseine , Antoine Huguenin , Nadia Guennouni , Edith Mazars , Solène Le Gal , Milène Sasso , Sophie Brun , Lucile Cadot , Carole Cassagne , Estelle Cateau , Jean-Pierre Gangneux , Maxime Moniot , Anne-Laure Roux , Céline Tournus , Nicole Desbois-Nogard , Alain Le Coustumier , Olivier Moquet , Alexandre Alanio , Françoise Dromer , Auteur inconnu

Aspergillus Test Profiles and Mortality in Critically Ill COVID-19 Patients.

Journal of clinical microbiology

Avec: Mehmet Ergün , Roger J M Brüggemann , Alexandre Alanio , Sarah Dellière , Andreas van Arkel , Robbert G Bentvelsen , Tom Rijpstra , Simone van der Sar-van der Brugge , Katrien Lagrou , Nico A F Janssen , Jochem B Buil , Karin van Dijk , Willem J G Melchers , Monique H E Reijers , Jeroen A Schouten , Joost Wauters , Alan Cordey , Shuchita Soni , P Lewis White , Frank L van de Veerdonk , Paul E Verweij

Emergence of Difficult-to-Treat Tinea Corporis Caused by Trichophyton mentagrophytes Complex Isolates, Paris, France.

Emerging infectious diseases

Avec: Sarah Dellière , Brune Joannard , Mazouz Benderdouche , Anselme Mingui , Maud Gits-Muselli , Samia Hamane , Alexandre Alanio , Antoine Petit , Germaine Gabison , Martine Bagot , Stéphane Bretagne

In Vitro Titan Cell Generation in Cryptococcus neoformans and Automated Cell Size Measurements.

Methods in molecular biology (Clifton, N.J.)

Avec: Benjamin Hommel , Aude Sturny-Leclère , Alexandre Alanio

Gradient concentration strip-specific epidemiological cut-off values of antifungal drugs in various yeast species and five prevalent Aspergillus species complexes.

Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases

Avec: Victor Mercier , Valérie Letscher-Bru , Marie-Elisabeth Bougnoux , Laurence Delhaes , Francoise Botterel , Danièle Maubon , Frédéric Dalle , Alexandre Alanio , Sandrine Houzé , Eric Dannaoui , Carole Cassagne , Sophie Cassaing , Marie-Fleur Durieux , Arnaud Fekkar , Jean-Philippe Bouchara , Jean-Pierre Gangneux , Julie Bonhomme , Damien Dupont , Damien Costa , Boualem Sendid , Taieb Chouaki , Nathalie Bourgeois , Antoine Huguenin , Sophie Brun , Caroline Mahinc , Lilia Hasseine , Solène Le Gal , Anne-Pauline Bellanger , Eric Bailly , Florent Morio , Céline Nourrisson , Nicole Desbois-Nogard , Estelle Perraud-Cateau , Anne Debourgogne , Hélène Yéra , Laurence Lachaud , Milène Sasso

A multicentre external quality assessment: A first step to standardise PCR protocols for the diagnosis of histoplasmosis and coccidioidomycosis.

Mycoses

Avec: Dunja Wilmes , Ferry Hagen , Cristina Verissimo , Alexandre Alanio , Volker Rickerts , Maria José Buitrago

Cryptococcal meningitis and cerebral vasculitis in a patient with primary intestinal lymphangiectasia: a case report.

European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology

Avec: Martin Mathurin , Sandra Devatine , Aude Kopp-Derouet , Antoine Guillonnet , Alexandre Alanio , Nelson Lourenco , Victoria Manda , Véronique Delcey , Jean-Michel Molina , Pierre Sellier

Auranofin is active against Histoplasma capsulatum and reduces the expression of virulence-related genes.

PLoS neglected tropical diseases

Avec: Marcos de Abreu Almeida , Lilian Cristiane Baeza , Leandro B R Silva , Andréa Reis Bernardes-Engemann , Fernando Almeida-Silva , Rowena Alves Coelho , Iara Bastos de Andrade , Dario Corrêa-Junior , Susana Frases , Rosely Maria Zancopé-Oliveira , Alexandre Alanio , Carlos Pelleschi Taborda , Rodrigo Almeida-Paes

Reverse-transcriptase real-time PCR in the diagnostic strategy for invasive infections caused by

Journal of clinical microbiology

Avec: Charles Gibert , Pauline Tirard-Collet , Charline Miossec , Damien Dupont , Florence Persat , Martine Wallon , Florence Ader , Gilles Devouassoux , Sophie Ducastelle , Hélène Labussière-Wallet , Sylvie Paulus , Céline Guichon , Anne-Claire Lukaszewicz , Jean-Christophe Richard , Florent Wallet , Alexandre Alanio , Meja Rabodonirina , Jean Menotti

Outbreak-Causing Fungi: Pneumocystis jirovecii.

Mycopathologia

Avec: Sarah Dellière , Maud Gits-Muselli , Stéphane Bretagne , Alexandre Alanio

Deep cutaneous fungal infections in solid-organ transplant recipients.

Journal of the American Academy of Dermatology

Avec: Agnès Galezowski , Julie Delyon , Laurence Le Cleach , Sarah Guégan , Emilie Ducroux , Alexandre Alanio , Diane Lastennet , Philippe Moguelet , Ali Dadban , Marie Thérèse Leccia , François Le Pelletier , Camille Francès , Céleste Lebbé , Stéphane Barete , Auteur inconnu

Quantification of

Journal of fungi (Basel, Switzerland)

Avec: Sarah Dellière , Maud Gits-Muselli , P Lewis White , Carlo Mengoli , Stéphane Bretagne , Alexandre Alanio

Time to and differential time to blood culture positivity for assessing catheter-related yeast fungaemia: A longitudinal, 7-year study in a single university hospital.

Mycoses

Avec: Maud Gits-Muselli , Stéphane Villiers , Samia Hamane , Béatrice Berçot , Jean-Luc Donay , Blandine Denis , Nicolas Guigue , Alexandre Alanio , Stéphane Bretagne

New Insights Into Cryptococcus Spp. Biology and Cryptococcal Meningitis.

Current neurology and neuroscience reports

Avec: Elvis Temfack , Timothée Boyer-Chammard , David Lawrence , Sarah Delliere , Angela Loyse , Fanny Lanternier , Alexandre Alanio , Olivier Lortholary

ECMM CandiReg-A ready to use platform for outbreaks and epidemiological studies.

Mycoses

Avec: Philipp Koehler , Maiken Cavling Arendrup , Sevtap Arikan-Akdagli , Matteo Bassetti , Stéphane Bretagne , Lena Klingspor , Katrien Lagrou , Jacques F Meis , Riina Rautemaa-Richardson , Silke Schelenz , Axel Hamprecht , Felix C Koehler , Oliver Kurzai , Jon Salmanton-García , Jörg-Janne Vehreschild , Alexandre Alanio , Ana Alastruey-Izquierdo , Valentina Arsic Arsenijevic , Jean-Pierre Gangneux , Neil A R Gow , Suzana Hadina , Petr Hamal , Elizabeth Johnson , Nikolay Klimko , Cornelia Lass-Flörl , Mihai Mares , Volkan Özenci , Tamas Papp , Emmanuel Roilides , Raquel Sabino , Esther Segal , Alida Fe Talento , Anna Maria Tortorano , Paul E Verweij , Martin Hoenigl , Oliver A Cornely , Auteur inconnu

Fungal infections in mechanically ventilated patients with COVID-19 during the first wave: the French multicentre MYCOVID study.

The Lancet. Respiratory medicine

Avec: Jean-Pierre Gangneux , Eric Dannaoui , Arnaud Fekkar , Charles-Edouard Luyt , Françoise Botterel , Nicolas De Prost , Jean-Marc Tadié , Florian Reizine , Sandrine Houzé , Jean-François Timsit , Xavier Iriart , Béatrice Riu-Poulenc , Boualem Sendid , Saad Nseir , Florence Persat , Florent Wallet , Patrice Le Pape , Emmanuel Canet , Ana Novara , Melek Manai , Estelle Cateau , Arnaud W Thille , Sophie Brun , Yves Cohen , Alexandre Alanio , Bruno Mégarbane , Muriel Cornet , Nicolas Terzi , Lionel Lamhaut , Estelle Sabourin , Guillaume Desoubeaux , Stephan Ehrmann , Christophe Hennequin , Guillaume Voiriot , Gilles Nevez , Cécile Aubron , Valérie Letscher-Bru , Ferhat Meziani , Marion Blaize , Julien Mayaux , Antoine Monsel , Frédérique Boquel , Florence Robert-Gangneux , Yves Le Tulzo , Philippe Seguin , Hélène Guegan , Brice Autier , Matthieu Lesouhaitier , Romain Pelletier , Sorya Belaz , Christine Bonnal , Antoine Berry , Jordan Leroy , Nadine François , Jean-Christophe Richard , Sylvie Paulus , Laurent Argaud , Damien Dupont , Jean Menotti , Florent Morio , Marie Soulié , Carole Schwebel , Cécile Garnaud , Juliette Guitard , Solène Le Gal , Dorothée Quinio , Jeff Morcet , Bruno Laviolle , Jean-Ralph Zahar , Marie-Elisabeth Bougnoux

The Potential Role of Clinical Metagenomics in Infectious Diseases: Therapeutic Perspectives.

Drugs

Avec: Camille d'Humières , Maud Salmona , Sarah Dellière , Stefano Leo , Christophe Rodriguez , Cécile Angebault , Alexandre Alanio , Slim Fourati , Vladimir Lazarevic , Paul-Louis Woerther , Jacques Schrenzel , Etienne Ruppé

Evaluation of Serum Mucorales Polymerase Chain Reaction (PCR) for the Diagnosis of Mucormycoses: The MODIMUCOR Prospective Trial.

Clinical infectious diseases : an official publication of the Infectious Diseases Society of America

Avec: Laurence Millon , Denis Caillot , Ana Berceanu , Stéphane Bretagne , Fanny Lanternier , Florent Morio , Valérie Letscher-Bru , Frédéric Dalle , Blandine Denis , Alexandre Alanio , David Boutoille , Marie Elisabeth Bougnoux , Françoise Botterel , Taieb Chouaki , Amandine Charbonnier , Florence Ader , Damien Dupont , Anne Pauline Bellanger , Steffi Rocchi , Emeline Scherer , Houssein Gbaguidi-Haore , Raoul Herbrecht

An overview of using fungal DNA for the diagnosis of invasive mycoses.

Expert review of molecular diagnostics

Avec: P Lewis White , Alexandre Alanio , Lottie Brown , Mario Cruciani , Ferry Hagen , Rebecca Gorton , Michaela Lackner , Laurence Millon , C Oliver Morton , Riina Rautemaa-Richardson , Rosemary A Barnes , J Peter Donnelly , Juergen Loffler , Auteur inconnu

First Patient-to-Patient Intrahospital Transmission of Clade I Candida auris in France Revealed after a Two-Month Incubation Period.

Microbiology spectrum

Avec: Alexandre Alanio , Hannah Marie Snell , Camille Cordier , Marie Desnos-Olivier , Sarah Dellière , Nesrine Aissaoui , Aude Sturny-Leclère , Elodie Da Silva , Cyril Eblé , Martine Rouveau , Micheline Thégat , Widad Zebiche , Matthieu Lafaurie , Blandine Denis , Sophie Touratier , Mourad Benyamina , Emmanuel Dudoignon , Samia Hamane , Christina A Cuomo , François Dépret

Open forum infectious diseases

Avec: Olivier Paccoud , Marie Desnos-Ollivier , Sophie Cassaing , Karine Boukris-Sitbon , Alexandre Alanio , Anne-Pauline Bellanger , Christine Bonnal , Julie Bonhomme , Françoise Botterel , Marie-Elisabeth Bougnoux , Sophie Brun , Taieb Chouaki , Muriel Cornet , Eric Dannaoui , Magalie Demar , Nicole Desbois-Nogard , Marie-Fleur Durieux , Loïc Favennec , Arnaud Fekkar , Frederic Gabriel , Jean-Pierre Gangneux , Juliette Guitard , Lilia Hasseine , Antoine Huguenin , Solène Le Gal , Valérie Letscher-Bru , Caroline Mahinc , Florent Morio , Muriel Nicolas , Célia Rouges , Estelle Cateau , Florence Persat , Philippe Poirier , Stéphane Ranque , Gabrielle Roosen , Anne-Laure Roux , Milène Sasso , Olivier Lortholary , Fanny Lanternier , Auteur inconnu

Global guideline for the diagnosis and management of cryptococcosis: an initiative of the ECMM and ISHAM in cooperation with the ASM.

The Lancet. Infectious diseases

Avec: Christina C Chang , Thomas S Harrison , Tihana A Bicanic , Methee Chayakulkeeree , Tania C Sorrell , Adilia Warris , Ferry Hagen , Andrej Spec , Rita Oladele , Nelesh P Govender , Sharon C Chen , Christopher H Mody , Andreas H Groll , Yee-Chun Chen , Michail S Lionakis , Alexandre Alanio , Elizabeth Castañeda , Jairo Lizarazo , José E Vidal , Takahiro Takazono , Martin Hoenigl , Jan-Willem Alffenaar , Jean-Pierre Gangneux , Rajeev Soman , Li-Ping Zhu , Alexandro Bonifaz , Joseph N Jarvis , Jeremy N Day , Nikolai Klimko , Jon Salmanton-García , Grégory Jouvion , David B Meya , David Lawrence , Sebastian Rahn , Felix Bongomin , Brendan J McMullan , Rosanne Sprute , Tinashe K Nyazika , Justin Beardsley , Fabianne Carlesse , Christopher H Heath , Olusola O Ayanlowo , Olga M Mashedi , Flavio Queiroz-Telles Filho , Mina C Hosseinipour , Atul K Patel , Elvis Temfack , Nina Singh , Oliver A Cornely , David R Boulware , Olivier Lortholary , Peter G Pappas , John R Perfect

Induction of Dormancy in Cryptococcus neoformans In Vitro: The HypNOS Protocol.

Methods in molecular biology (Clifton, N.J.)

Avec: Ruchi Agrawal , Aude Sturny-Leclère , Raffael J A de Castro , Alexandre Alanio

Evolutionary origin and population diversity of a cryptic hybrid pathogen.

Nature communications

Avec: Jacob L Steenwyk , Sonja Knowles , Rafael W Bastos , Charu Balamurugan , David Rinker , Matthew E Mead , Christopher D Roberts , Huzefa A Raja , Yuanning Li , Ana Cristina Colabardini , Patrícia Alves de Castro , Thaila Fernanda Dos Reis , Adiyantara Gumilang , María Almagro-Molto , Alexandre Alanio , Dea Garcia-Hermoso , Endrews Delbaje , Laís Pontes , Camila Figueiredo Pinzan , Angélica Zaninelli Schreiber , David Canóvas , Rafael Sanchez Luperini , Katrien Lagrou , Egídio Torrado , Fernando Rodrigues , Nicholas H Oberlies , Xiaofan Zhou , Gustavo H Goldman , Antonis Rokas

Reappraising Cladophialophora bantiana phaeohyphomycosis in France: retrospective nation-based study.

The Lancet. Microbe

Avec: Olivier Lortholary , Dea Garcia-Hermoso , Aude Sturny-Leclère , Karine Sitbon , Céline Nourrisson , Valérie Letscher-Bru , Nicole Desbois-Nogard , Ferouze Bani-Sadr , Frédéric Bastides , Boris Bienvenu , Camille Cordier , Anne Coste , François Danion , Tristan Dégot , David Delarbre , Arnaud Fekkar , Christophe Garcie , Cyril Garrouste , Maud Gits-Muselli , Emilie Guemas , Antoine Huguenin , Frédéric Janvier , Nassim Kamar , Cyril Kervinio , Solène Le Gal , Olivier Lesens , Marie Machouart , Florence Persat , Sandrine Picot , Anahita Rouze , Stéphane Ranque , Yvon Ruch , Matthieu Saada , Sarah Stabler , Alexandre Alanio , Fanny Lanternier , Guillaume Desoubeaux

Evaluation of the COVID-19 IgG/IgM Rapid Test from Orient Gene Biotech.

Journal of clinical microbiology

Avec: Sarah Dellière , Maud Salmona , Marine Minier , Audrey Gabassi , Alexandre Alanio , Jérôme Le Goff , Constance Delaugerre , Marie-Laure Chaix , Auteur inconnu

Recovery of a triazole-resistant

Medical mycology case reports

Avec: Théo Ghelfenstein-Ferreira , Anastasia Saade , Alexandre Alanio , Stéphane Bretagne , Raffael Araujo de Castro , Samia Hamane , Elie Azoulay , Swann Bredin , Sarah Dellière

Aspergillus flavus malignant external otitis in a diabetic patient: case report and literature review.

Infection

Avec: Maud Pichon , Véronique Joly , Nicolas Argy , Sandrine Houze , Stéphane Bretagne , Alexandre Alanio , Michel Wassef , Benjamin Verillaud , Yazdan Yazdanpanah

The enigmatic role of fungal annexins: the case of Cryptococcus neoformans.

Microbiology (Reading, England)

Avec: Maria Maryam , Man Shun Fu , Alexandre Alanio , Emma Camacho , Diego S Goncalves , Eden E Faneuff , Nina T Grossman , Arturo Casadevall , Carolina Coelho

Emerging mould infections: Get prepared to meet unexpected fungi in your patient.

Medical mycology

Avec: Sarah Dellière , Olga Rivero-Menendez , Cécile Gautier , Dea Garcia-Hermoso , Ana Alastruey-Izquierdo , Alexandre Alanio

Recent advances in managing HIV-associated cryptococcal meningitis.

F1000Research

Avec: Timothée Boyer-Chammard , Elvis Temfack , Alexandre Alanio , Joseph N Jarvis , Thomas S Harrison , Olivier Lortholary

Cryptococcus neoformans resists to drastic conditions by switching to viable but non-culturable cell phenotype.

PLoS pathogens

Avec: Benjamin Hommel , Aude Sturny-Leclère , Stevenn Volant , Nathanaël Veluppillai , Magalie Duchateau , Chen-Hsin Yu , Véronique Hourdel , Hugo Varet , Mariette Matondo , John R Perfect , Arturo Casadevall , Françoise Dromer , Alexandre Alanio

Why are so many cases of invasive aspergillosis missed?

Medical mycology

Avec: François Danion , Claire Rouzaud , Amélie Duréault , Sylvain Poirée , Marie-Elisabeth Bougnoux , Alexandre Alanio , Fanny Lanternier , Olivier Lortholary

Different repartition of the cryptic species of black aspergilli according to the anatomical sites in human infections, in a French University hospital.

Medical mycology

Avec: Maud Gits-Muselli , Samia Hamane , Benjamin Verillaud , Elisa Cherpin , Blandine Denis , Louise Bondeelle , Sophie Touratier , Alexandre Alanio , Dea Garcia-Hermoso , Stéphane Bretagne

Invasive Rhinosinusitis Caused by

Journal of fungi (Basel, Switzerland)

Avec: Olivier Paccoud , Nicolas Vignier , Mohammed Boui , Mélanie Migaud , Pierre Vironneau , Romain Kania , Frédéric Méchaï , Sophie Brun , Alexandre Alanio , Arnault Tauziède-Espariat , Homa Adle-Biassette , Elise Ouedraogo , Jacinta Bustamante , Olivier Bouchaud , Jean-Laurent Casanova , Anne Puel , Fanny Lanternier

Detection of circulating DNA for the diagnosis of invasive fusariosis: retrospective analysis of 15 proven cases.

Medical mycology

Avec: Sarah Dellière , Juliette Guitard , Marcela Sabou , Cécile Angebault , Maxime Moniot , Marjorie Cornu , Samia Hamane , Marie-Elisabeth Bougnoux , Sébastien Imbert , Grégoire Pasquier , Françoise Botterel , Dea Garcia-Hermoso , Alexandre Alanio

Engineered Fluorescent Strains of Cryptococcus neoformans: a Versatile Toolbox for Studies of Host-Pathogen Interactions and Fungal Biology, Including the Viable but Nonculturable State.

Microbiology spectrum

Avec: Raffael Júnio Araújo de Castro , Marco Túlio Aidar Mariano Rêgo , Fabiana S Brandão , Ana Laura Alfonso Pérez , Janice Lisboa De Marco , Marcio José Poças-Fonseca , Connie Nichols , J Andrew Alspaugh , Maria Sueli S Felipe , Alexandre Alanio , Anamélia Lorenzetti Bocca , Larissa Fernandes

Features of cryptococcosis among 652 HIV-seronegative individuals in France: a cross-sectional observational study (2005-2020).

Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases

Avec: Olivier Paccoud , Marie Desnos-Ollivier , Florence Persat , Magalie Demar , Karine Boukris-Sitbon , Anne-Pauline Bellanger , Julie Bonhomme , Christine Bonnal , Françoise Botterel , Marie-Elisabeth Bougnoux , Sophie Brun , Sophie Cassaing , Estelle Cateau , Taieb Chouaki , Muriel Cornet , Eric Dannaoui , Nicole Desbois-Nogard , Marie-Fleur Durieux , Loïc Favennec , Arnaud Fekkar , Frederic Gabriel , Jean-Pierre Gangneux , Juliette Guitard , Lilia Hasseine , Antoine Huguenin , Solène Le Gal , Valérie Letscher-Bru , Caroline Mahinc , Florent Morio , Muriel Nicolas , Philippe Poirier , Stéphane Ranque , Gabrielle Roosen , Célia Rouges , Anne-Laure Roux , Milène Sasso , Alexandre Alanio , Olivier Lortholary , Fanny Lanternier , Auteur inconnu

Assessing Phagocytosis of Cryptococcus neoformans Cells in Human Monocytes or the J774 Murine Macrophage Cell Line.

Methods in molecular biology (Clifton, N.J.)

Avec: Emmanuel Lafont , Aude Sturny-Leclère , Carolina Coelho , Fanny Lanternier , Alexandre Alanio

Allergic fungal rhinosinusitis and eosinophilic mucin chronic rhinosinusitis: Differential diagnostic criteria. A two-center comparative study following STROBE methodology.

European annals of otorhinolaryngology, head and neck diseases

Avec: A Dubois , F Simon , A Alanio , A Guillonnet , R Kaci , P Herman , J-B Lecanu , B Verillaud

Multicenter Evaluation of the FilmArray Blood Culture Identification 2 Panel for Pathogen Detection in Bloodstream Infections.

Microbiology spectrum

Avec: François Caméléna , Gauthier Péan de Ponfilly , Hélène Pailhoriès , Lucas Bonzon , Alexandre Alanio , Thibaut Poncin , Matthieu Lafaurie , François Dépret , Emmanuel Cambau , Sylvain Godreuil , Rachel Chenouard , Alban Le Monnier , Hervé Jacquier , Béatrice Berçot

Revealing the hidden interplay: the unexplored relationship between fungi and viruses beyond HIV, SARS-CoV-2 and influenza.

Medical mycology

Avec: Théo Ghelfenstein-Ferreira , Alexandra Serris , Maud Salmona , Fanny Lanternier , Alexandre Alanio

Current knowledge and practice of Candida auris screening in France: A nationwide survey from the French Society of Medical Mycology (SFMM).

Journal de mycologie medicale

Avec: J Guitard , A P Bellanger , J Dorin , S Cassaing , A Capitaine , F Gabriel , M Nicolas , N Coron , P Penn , M Moniot , D Quinio , S Ranque , M Sasso , P Lepape , E Dannaoui , S Brun , C Lacroix , M Cornu , A Debourgogne , M F Durieux , G Laurent , V Bru , N Bourgeois , K Brunet , T Chouaki , A Huguenin , L Hasseine , D Maubon , J P Gangneux , N Desbois-Nogard , S Houze , F Dalle , M E Bougnoux , A Alanio , D Costa , F Botterel , C Hennequin

Epidemiology and prognostic factors of mucormycosis in France (2012-2022): a cross-sectional study nested in a prospective surveillance programme.

The Lancet regional health. Europe

Avec: Laura Gouzien , Didier Che , Sophie Cassaing , Olivier Lortholary , Valérie Letscher-Bru , Olivier Paccoud , Thomas Obadia , Florent Morio , Maxime Moniot , Estelle Cateau , Marie Elisabeth Bougnoux , Taieb Chouaki , Lilia Hasseine , Guillaume Desoubeaux , Cecile Gautier , Caroline Mahinc-Martin , Antoine Huguenin , Julie Bonhomme , Karine Sitbon , Julien Durand , Alexandre Alanio , Laurence Millon , Dea Garcia-Hermoso , Fanny Lanternier , Auteur inconnu

The Fungal PCR Initiative's evaluation of in-house and commercial Pneumocystis jirovecii qPCR assays: Toward a standard for a diagnostics assay.

Medical mycology

Avec: Maud Gits-Muselli , P Lewis White , Carlo Mengoli , Sharon Chen , Brendan Crowley , Gijs Dingemans , Emilie Fréalle , Rebecca L Gorton , Malcom Guiver , Ferry Hagen , Catriona Halliday , Gemma Johnson , Katrien Lagrou , Martina Lengerova , Willem J G Melchers , Lily Novak-Frazer , Riina Rautemaa-Richardson , Emeline Scherer , Joerg Steinmann , Mario Cruciani , Rosemary Barnes , J Peter Donnelly , Juergen Loeffler , Stéphane Bretagne , Alexandre Alanio

Correction: Cryptococcus neoformans resists to drastic conditions by switching to viable but non-culturable cell phenotype.

PLoS pathogens

Correction to: AMBIsome Therapy Induction OptimisatioN (AMBITION): High Dose AmBisome for Cryptococcal Meningitis Induction Therapy in sub-Saharan Africa: Study Protocol for a Phase 3 Randomised Controlled Non-Inferiority Trial.

Trials

Avec: David S Lawrence , Nabila Youssouf , Síle F Molloy , Alexandre Alanio , Melanie Alufandika , David R Boulware , Timothée Boyer-Chammard , Tao Chen , Francoise Dromer , Admire Hlupeni , William Hope , Mina C Hosseinipour , Cecilia Kanyama , Oliver Lortholary , Angela Loyse , David B Meya , Mosepele Mosepele , Conrad Muzoora , Henry C Mwandumba , Chiratidzo E Ndhlovu , Louis Niessen , Charlotte Schutz , Katharine E Stott , Duolao Wang , David G Lalloo , Graeme Meintjes , Shabbar Jaffar , Thomas S Harrison , Joseph N Jarvis

Outcome and potentially modifiable risk factors for candidemia in critically ill burns patients: A matched cohort study.

Mycoses

Avec: Emmanuel Dudoignon , Alexandre Alanio , James Anstey , François Depret , Maxime Coutrot , Alexandre Fratani , Marion Jully , Alexandru Cupaciu , Maïté Chaussard , Haikel Oueslati , Axelle Ferry , Mourad Benyamina , Christian de Tymowski , David Boccara , Kevin Serror , Marc Chaouat , Maurice Mimoun , Matthieu Lafaurie , Blandine Denis , Maud Gits-Muselli , Stephane Bretagne , Alexandre Mebazaa , Matthieu Legrand , Sabri Soussi , Auteur inconnu

Prospective comparison of (1,3)-beta-D-glucan detection using colorimetric and turbidimetric assays for diagnosing invasive fungal disease.

Medical mycology

Avec: Alexandre Alanio , Maud Gits-Muselli , Nicolas Guigue , Blandine Denis , Anne Bergeron , Sophie Touratier , Samia Hamane , Stéphane Bretagne

Risk factors associated with COVID-19-associated pulmonary aspergillosis in ICU patients: a French multicentric retrospective cohort.

Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases

Avec: Sarah Dellière , Emmanuel Dudoignon , Sofiane Fodil , Sebastian Voicu , Magalie Collet , Pierre-Antoine Oillic , Maud Salmona , François Dépret , Théo Ghelfenstein-Ferreira , Benoit Plaud , Benjamin Chousterman , Stéphane Bretagne , Elie Azoulay , Alexandre Mebazaa , Bruno Megarbane , Alexandre Alanio

Evaluation of a New Histoplasma spp. Quantitative RT-PCR Assay.

The Journal of molecular diagnostics : JMD

Avec: Alexandre Alanio , Maud Gits-Muselli , Fanny Lanternier , Aude Sturny-Leclère , Marion Benazra , Samia Hamane , Anderson Messias Rodrigues , Dea Garcia-Hermoso , Olivier Lortholary , Françoise Dromer , Stéphane Bretagne , Auteur inconnu

Invasive fungal diseases in patients with autoimmune diseases: a case series from the French RESSIF network.

RMD open

Avec: Simon Galmiche , Benjamin Thoreau , Stéphane Bretagne , Alexandre Alanio , André Paugam , Valérie Letscher-Bru , Sophie Cassaing , Jean-Pierre Gangneux , Hélène Guegan , Loïc Favennec , Alida Minoza , Florent Morio , Julie Bonhomme , Guillaume Desoubeaux , Odile Eloy , Lilia Hasseine , Milène Sasso , Laurence Millon , Anne-Pauline Bellanger , Philippe Poirier , Maxime Moniot , Taieb Chouaki , Antoine Huguenin , Frédéric Dalle , Bernard Bouteille , Muriel Nicolas , Nicole Desbois-Nogard , Marie-Elisabeth Bougnoux , François Danion , Vincent Poindron , Antoine Néel , Karine Boukris-Sitbon , Fanny Lanternier , Benjamin Terrier , Auteur inconnu

Cryptococcal Meningitis in Kidney Transplant Recipients: A Two-Decade Cohort Study in France.

Pathogens (Basel, Switzerland)

Avec: Laurène Tardieu , Gillian Divard , Olivier Lortholary , Anne Scemla , Éric Rondeau , Isabelle Accoceberry , Rémi Agbonon , Alexandre Alanio , Adela Angoulvant , Laetitia Albano , Philippe Attias , Anne Pauline Bellanger , Dominique Bertrand , Julie Bonhomme , Françoise Botterel , Nicolas Bouvier , Matthias Buchler , Taieb Chouaki , Thomas Crépin , Marie-Fleur Durieux , Guillaume Desoubeaux , Gary Doppelt , Loïc Favennec , Arnaud Fekkar , Ophélie Fourdinier , Marie Frimat , Jean-Pierre Gangneux , Claire Garandeau , Lilia Hasseine , Christophe Hennequin , Xavier Iriart , Nassim Kamar , Hannah Kaminski , Raphael Kormann , Laurence Lachaud , Christophe Legendre , Moglie Le Quintrec Donnette , Jordan Leroy , Charlène Levi , Marie Machouart , David Marx , Jean Menotti , Valérie Moal , Florent Morio , Natacha Mrozek , Muriel Nicolas , Philippe Poirier , Marie-Noelle Peraldi , Benjamin Poussot , Stéphane Ranque , Jean-Philippe Rerolle , Boualem Sendid , Renaud Snanoudj , Jérôme Tourret , Marc Vasse , Cécile Vigneau , Odile Villard , Laurent Mesnard , Fanny Lanternier , Cédric Rafat

Réseau de co-auteurs

Stéphane Bretagne 24 collaborations

Sarah Dellière 18 collaborations

Samia Hamane 15 collaborations

Fanny Lanternier 15 collaborations

Maud Gits-Muselli 13 collaborations

None None 13 collaborations

Olivier Lortholary 12 collaborations

Blandine Denis 11 collaborations

Aude Sturny-Leclère 10 collaborations

Valérie Letscher-Bru 10 collaborations

Jean-Pierre Gangneux 9 collaborations

Taieb Chouaki 8 collaborations

Florent Morio 8 collaborations

Françoise Botterel 7 collaborations

Lilia Hasseine 7 collaborations

Antoine Huguenin 7 collaborations

Marie-Elisabeth Bougnoux 7 collaborations

Dea Garcia-Hermoso 7 collaborations

Katrien Lagrou 6 collaborations

Théo Ghelfenstein-Ferreira 6 collaborations

P Lewis White 6 collaborations

Florence Persat 6 collaborations

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Solène Le Gal 6 collaborations

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Nicole Desbois-Nogard 6 collaborations

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Martin Hoenigl 5 collaborations

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Oliver A Cornely 5 collaborations

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