Darrell N Kotton

Affiliations

Center for Regenerative Medicine of Boston University and Boston Medical Center, Boston, MA 02118, USA.
The Pulmonary Center and Department of Medicine, Boston University School of Medicine, Boston, MA 02118, USA.

Publications (56)

Human iPSC-derived alveolar and airway epithelial cells can be cultured at air-liquid interface and express SARS-CoV-2 host factors.

bioRxiv : the preprint server for biology

Avec: Kristine M Abo , Liang Ma , Taylor Matte , Jessie Huang , Konstantinos D Alysandratos , Rhiannon B Werder , Aditya Mithal , Mary Lou Beermann , Jonathan Lindstrom-Vautrin , Gustavo Mostoslavsky , Laertis Ikonomou , Darrell N Kotton , Finn Hawkins , Andrew Wilson , Carlos Villacorta-Martin

Morphological Cell Profiling of SARS-CoV-2 Infection Identifies Drug Repurposing Candidates for COVID-19.

bioRxiv : the preprint server for biology

Avec: Carmen Mirabelli , Jesse W Wotring , Charles J Zhang , Sean M McCarty , Reid Fursmidt , Tristan Frum , Namrata S Kadambi , Anya T Amin , Teresa R O'Meara , Carla D Pretto , Jason R Spence , Jessie Huang , Konstantinos D Alysandratos , Darrell N Kotton , Samuel K Handelman , Christiane E Wobus , Kevin J Weatherwax , George A Mashour , Matthew J O'Meara , Jonathan Z Sexton

Generation of a Purified iPSC-Derived Smooth Muscle-like Population for Cell Sheet Engineering.

Stem cell reports

Avec: George Kwong , Hector A Marquez , Chian Yang , Joyce Y Wong , Darrell N Kotton

Sequence logic at enhancers governs a dual mechanism of endodermal organ fate induction by FOXA pioneer factors.

Nature communications

Avec: Ryan J Geusz , Allen Wang , Dieter K Lam , Nicholas K Vinckier , Konstantinos-Dionysios Alysandratos , David A Roberts , Jinzhao Wang , Samy Kefalopoulou , Araceli Ramirez , Yunjiang Qiu , Joshua Chiou , Kyle J Gaulton , Bing Ren , Darrell N Kotton , Maike Sander

Human alveolar type 2 epithelium transdifferentiates into metaplastic KRT5

Nature cell biology

Avec: Jaymin J Kathiriya , Chaoqun Wang , Minqi Zhou , Alexis Brumwell , Monica Cassandras , Claude Jourdan Le Saux , Max Cohen , Kostantinos-Dionysios Alysandratos , Bruce Wang , Paul Wolters , Michael Matthay , Darrell N Kotton , Harold A Chapman , Tien Peng

Durable alveolar engraftment of PSC-derived lung epithelial cells into immunocompetent mice.

Cell stem cell

Avec: Michael J Herriges , Maria Yampolskaya , Bibek R Thapa , Jonathan Lindstrom-Vautrin , Feiya Wang , Jessie Huang , Cheng-Lun Na , Liang Ma , McKenna M Montminy , Pushpinder Bawa , Carlos Villacorta-Martin , Pankaj Mehta , Darrell N Kotton

scTOP: physics-inspired order parameters for cellular identification and visualization.

Development (Cambridge, England)

Avec: Maria Yampolskaya , Michael J Herriges , Laertis Ikonomou , Darrell N Kotton , Pankaj Mehta

Generation of human alveolar epithelial type I cells from pluripotent stem cells.

bioRxiv : the preprint server for biology

Avec: Claire L Burgess , Jessie Huang , Pushpinder Bawa , Konstantinos-Dionysios Alysandratos , Kasey Minakin , Michael P Morley , Apoorva Babu , Carlos Villacorta-Martin , Anne Hinds , Bibek R Thapa , Feiya Wang , Adeline M Matschulat , Edward E Morrisey , Xaralabos Varelas , Darrell N Kotton

Culture impact on the transcriptomic programs of primary and iPSC-derived human alveolar type 2 cells.

JCI insight

Avec: Konstantinos-Dionysios Alysandratos , Carolina Garcia-de-Alba , Changfu Yao , Patrizia Pessina , Jessie Huang , Carlos Villacorta-Martin , Olivia T Hix , Kasey Minakin , Claire L Burgess , Pushpinder Bawa , Aditi Murthy , Bindu Konda , Michael F Beers , Barry R Stripp , Carla F Kim , Darrell N Kotton

Spike and nsp6 are key determinants of SARS-CoV-2 Omicron BA.1 attenuation.

Nature

Avec: Da-Yuan Chen , Chue Vin Chin , Devin Kenney , Alexander H Tavares , Nazimuddin Khan , Hasahn L Conway , GuanQun Liu , Manish C Choudhary , Hans P Gertje , Aoife K O'Connell , Scott Adams , Darrell N Kotton , Alexandra Herrmann , Armin Ensser , John H Connor , Markus Bosmann , Jonathan Z Li , Michaela U Gack , Susan C Baker , Robert N Kirchdoerfer , Yachana Kataria , Nicholas A Crossland , Florian Douam , Mohsan Saeed

Impaired AMPK Control of Alveolar Epithelial Cell Metabolism Promotes Pulmonary Fibrosis.

bioRxiv : the preprint server for biology

Avec: Luis R Rodriguez , Konstantinos-Dionysios Alysandratos , Jeremy Katzen , Aditi Murthy , Willy Roque Barboza , Yaniv Tomer , Rebeca Acin-Perez , Anton Petcherski , Kasey Minakin , Paige Carson , Swati Iyer , Katrina Chavez , Charlotte H Cooper , Apoorva Babu , Aaron I Weiner , Andrew E Vaughan , Zoltan Arany , Orian S Shirihai , Darrell N Kotton , Michael F Beers

Derivation of self-renewing lung alveolar epithelial type II cells from human pluripotent stem cells.

Nature protocols

Avec: Anjali Jacob , Marall Vedaie , David A Roberts , Dylan C Thomas , Carlos Villacorta-Martin , Konstantinos-Dionysios Alysandratos , Finn Hawkins , Darrell N Kotton

Reconstructed Single-Cell Fate Trajectories Define Lineage Plasticity Windows during Differentiation of Human PSC-Derived Distal Lung Progenitors.

Cell stem cell

Avec: Killian Hurley , Jun Ding , Carlos Villacorta-Martin , Michael J Herriges , Anjali Jacob , Marall Vedaie , Konstantinos D Alysandratos , Yuliang L Sun , Chieh Lin , Rhiannon B Werder , Jessie Huang , Andrew A Wilson , Aditya Mithal , Gustavo Mostoslavsky , Irene Oglesby , Ignacio S Caballero , Susan H Guttentag , Farida Ahangari , Naftali Kaminski , Alejo Rodriguez-Fraticelli , Fernando Camargo , Ziv Bar-Joseph , Darrell N Kotton

Expression of Amyloidogenic Transthyretin Drives Hepatic Proteostasis Remodeling in an Induced Pluripotent Stem Cell Model of Systemic Amyloid Disease.

Stem cell reports

Avec: Richard M Giadone , Derek C Liberti , Taylor M Matte , Jessica D Rosarda , Celia Torres-Arancivia , Sabrina Ghosh , Jolene K Diedrich , Sandra Pankow , Nicholas Skvir , J C Jean , John R Yates , Andrew A Wilson , Lawreen H Connors , Darrell N Kotton , R Luke Wiseman , George J Murphy

Differentiation of human airway-organoids from induced pluripotent stem cells (iPSCs).

Methods in cell biology

Avec: Ruobing Wang , Katie B McCauley , Darrell N Kotton , Finn Hawkins

SARS-CoV-2 drives JAK1/2-dependent local complement hyperactivation.

Science immunology

Avec: Bingyu Yan , Tilo Freiwald , Daniel Chauss , Luopin Wang , Erin West , Carmen Mirabelli , Charles J Zhang , Eva-Maria Nichols , Nazish Malik , Richard Gregory , Marcus Bantscheff , Sonja Ghidelli-Disse , Martin Kolev , Tristan Frum , Jason R Spence , Jonathan Z Sexton , Konstantinos D Alysandratos , Darrell N Kotton , Stefania Pittaluga , Jack Bibby , Nathalie Niyonzima , Matthew R Olson , Shahram Kordasti , Didier Portilla , Christiane E Wobus , Arian Laurence , Michail S Lionakis , Claudia Kemper , Behdad Afzali , Majid Kazemian

Reconstructed signaling and regulatory networks identify potential drugs for SARS-CoV-2 infection.

bioRxiv : the preprint server for biology

Avec: Jun Ding , Jose Lugo-Martinez , Ye Yuan , Jessie Huang , Adam J Hume , Ellen L Suder , Elke Mühlberger , Darrell N Kotton , Ziv Bar-Joseph

Heterogeneity in Human Induced Pluripotent Stem Cell-derived Alveolar Epithelial Type II Cells Revealed with ABCA3/SFTPC Reporters.

American journal of respiratory cell and molecular biology

Avec: Yuliang L Sun , Killian Hurley , Carlos Villacorta-Martin , Jessie Huang , Anne Hinds , Krithi Gopalan , Ignacio S Caballero , Scott J Russo , Joseph A Kitzmiller , Jeffrey A Whitsett , Michael F Beers , Darrell N Kotton

Common genetic variation in humans impacts

bioRxiv : the preprint server for biology

Avec: Kristina Dobrindt , Daisy A Hoagland , Carina Seah , Bibi Kassim , Callan P O'Shea , Marina Iskhakova , Michael B Fernando , P J Michael Deans , Samuel K Powell , Ben Javidfar , Aleta Murphy , Cyril Peter , Rasmus Møeller , Meilin Fernandez Garcia , Masaki Kimura , Kentaro Iwasawa , John Crary , Darrell N Kotton , Takanori Takebe , Laura M Huckins , Benjamin R tenOever , Schahram Akbarian , Kristen J Brennand

Differentiation of human pluripotent stem cells into functional airway basal stem cells.

STAR protocols

Avec: Shingo Suzuki , Finn J Hawkins , Cristina Barillà , Mary Lou Beermann , Darrell N Kotton , Brian R Davis

Recapitulating human cardio-pulmonary co-development using simultaneous multilineage differentiation of pluripotent stem cells.

eLife

Avec: Wai Hoe Ng , Elizabeth K Johnston , Jun Jie Tan , Jacqueline M Bliley , Adam W Feinberg , Donna B Stolz , Ming Sun , Piyumi Wijesekara , Finn Hawkins , Darrell N Kotton , Xi Ren

The oral drug nitazoxanide restricts SARS-CoV-2 infection and attenuates disease pathogenesis in Syrian hamsters.

bioRxiv : the preprint server for biology

Avec: Lisa Miorin , Chad E Mire , Shahin Ranjbar , Adam J Hume , Jessie Huang , Nicholas A Crossland , Kris M White , Manon Laporte , Thomas Kehrer , Viraga Haridas , Elena Moreno , Aya Nambu , Sonia Jangra , Anastasija Cupic , Marion Dejosez , Kristine A Abo , Anna E Tseng , Rhiannon B Werder , Raveen Rathnasinghe , Tinaye Mutetwa , Irene Ramos , Julio Sainz de Aja , Carolina Garcia de Alba Rivas , Michael Schotsaert , Ronald B Corley , James V Falvo , Ana Fernandez-Sesma , Carla Kim , Jean-François Rossignol , Andrew A Wilson , Thomas Zwaka , Darrell N Kotton , Elke Mühlberger , Adolfo García-Sastre , Anne E Goldfeld

CoSpar identifies early cell fate biases from single-cell transcriptomic and lineage information.

Nature biotechnology

Avec: Shou-Wen Wang , Michael J Herriges , Kilian Hurley , Darrell N Kotton , Allon M Klein

Generating 3D Spheres and 2D Air-Liquid Interface Cultures of Human Induced Pluripotent Stem Cell-Derived Type 2 Alveolar Epithelial Cells.

Journal of visualized experiments : JoVE

Avec: Rhiannon B Werder , Jessie Huang , Kristine M Abo , Olivia T Hix , Kasey Minakin , Konstantinos-Dionysios Alysandratos , Carly Merritt , Kayleigh Berthiaume , Andrea B Alber , Claire L Burgess , Darrell N Kotton , Andrew A Wilson

Nascent matrix deposition supports alveolar organoid formation from aggregates in synthetic hydrogels.

bioRxiv : the preprint server for biology

Avec: Madeline K Eiken , Charlie J Childs , Lindy K Brastrom , Tristan Frum , Eleanor M Plaster , Orren Shachaf , Suzanne Pfeiffer , Justin E Levine , Konstantinos-Dionysios Alysandratos , Darrell N Kotton , Jason R Spence , Claudia Loebel

CRISPR interference interrogation of COPD GWAS genes reveals the functional significance of desmoplakin in iPSC-derived alveolar epithelial cells.

Science advances

Avec: Rhiannon B Werder , Tao Liu , Kristine M Abo , Jonathan Lindstrom-Vautrin , Carlos Villacorta-Martin , Jessie Huang , Anne Hinds , Nathan Boyer , Esther Bullitt , Marc Liesa , Edwin K Silverman , Darrell N Kotton , Michael H Cho , Xiaobo Zhou , Andrew A Wilson

Optimized ACE2 decoys neutralize antibody-resistant SARS-CoV-2 variants through functional receptor mimicry and treat infection in vivo.

Science advances

Avec: James A Torchia , Alexander H Tavares , Laura S Carstensen , Da-Yuan Chen , Jessie Huang , Tianshu Xiao , Sonia Mukherjee , Patrick M Reeves , Hua Tu , Ann E Sluder , Bing Chen , Darrell N Kotton , Richard A Bowen , Mohsan Saeed , Mark C Poznansky , Gordon J Freeman

The Cellular and Physiological Basis for Lung Repair and Regeneration: Past, Present, and Future.

Cell stem cell

Avec: Maria C Basil , Jeremy Katzen , Anna E Engler , Minzhe Guo , Michael J Herriges , Jaymin J Kathiriya , Rebecca Windmueller , Alexandra B Ysasi , William J Zacharias , Hal A Chapman , Darrell N Kotton , Jason R Rock , Hans-Willem Snoeck , Gordana Vunjak-Novakovic , Jeffrey A Whitsett , Edward E Morrisey

Generation of mesenchyme free intestinal organoids from human induced pluripotent stem cells.

Nature communications

Avec: Aditya Mithal , Amalia Capilla , Dar Heinze , Andrew Berical , Carlos Villacorta-Martin , Marall Vedaie , Anjali Jacob , Kristine Abo , Aleksander Szymaniak , Megan Peasley , Alexander Stuffer , John Mahoney , Darrell N Kotton , Finn Hawkins , Gustavo Mostoslavsky

Hidden neural states underlie canary song syntax.

Nature

Avec: Yarden Cohen , Jun Shen , Dawit Semu , Daniel P Leman , William A Liberti , L Nathan Perkins , Derek C Liberti , Darrell N Kotton , Timothy J Gardner

The in vivo genetic program of murine primordial lung epithelial progenitors.

Nature communications

Avec: Laertis Ikonomou , Michael J Herriges , Sara L Lewandowski , Robert Marsland , Carlos Villacorta-Martin , Ignacio S Caballero , David B Frank , Reeti M Sanghrajka , Keri Dame , Maciej M Kańduła , Julia Hicks-Berthet , Matthew L Lawton , Constantina Christodoulou , Attila J Fabian , Eric Kolaczyk , Xaralabos Varelas , Edward E Morrisey , John M Shannon , Pankaj Mehta , Darrell N Kotton

Derivation of Thyroid Follicular Cells From Pluripotent Stem Cells: Insights From Development and Implications for Regenerative Medicine.

Frontiers in endocrinology

Avec: Alberto Posabella , Andrea B Alber , Hendrik J Undeutsch , Raoul A Droeser , Anthony N Hollenberg , Laertis Ikonomou , Darrell N Kotton

SARS-CoV-2 Infection of Pluripotent Stem Cell-Derived Human Lung Alveolar Type 2 Cells Elicits a Rapid Epithelial-Intrinsic Inflammatory Response.

Cell stem cell

Avec: Jessie Huang , Adam J Hume , Kristine M Abo , Rhiannon B Werder , Carlos Villacorta-Martin , Konstantinos-Dionysios Alysandratos , Mary Lou Beermann , Chantelle Simone-Roach , Jonathan Lindstrom-Vautrin , Judith Olejnik , Ellen L Suder , Esther Bullitt , Anne Hinds , Arjun Sharma , Markus Bosmann , Ruobing Wang , Finn Hawkins , Eric J Burks , Mohsan Saeed , Andrew A Wilson , Elke Mühlberger , Darrell N Kotton

SARS-CoV-2 Disrupts Proximal Elements in the JAK-STAT Pathway.

Journal of virology

Avec: Da-Yuan Chen , Nazimuddin Khan , Brianna J Close , Raghuveera K Goel , Benjamin Blum , Alexander H Tavares , Devin Kenney , Hasahn L Conway , Jourdan K Ewoldt , Vipul C Chitalia , Nicholas A Crossland , Christopher S Chen , Darrell N Kotton , Susan C Baker , Serge Y Fuchs , John H Connor , Florian Douam , Andrew Emili , Mohsan Saeed

Human distal airways contain a multipotent secretory cell that can regenerate alveoli.

Nature

Avec: Maria C Basil , Fabian L Cardenas-Diaz , Jaymin J Kathiriya , Michael P Morley , Justine Carl , Alexis N Brumwell , Jeremy Katzen , Katherine J Slovik , Apoorva Babu , Su Zhou , Madison M Kremp , Katherine B McCauley , Shanru Li , Joseph D Planer , Shah S Hussain , Xiaoming Liu , Rebecca Windmueller , Yun Ying , Kathleen M Stewart , Michelle Oyster , Jason D Christie , Joshua M Diamond , John F Engelhardt , Edward Cantu , Steven M Rowe , Darrell N Kotton , Harold A Chapman , Edward E Morrisey

Recombinant Lloviu virus as a tool to study viral replication and host responses.

PLoS pathogens

Avec: Adam J Hume , Baylee Heiden , Judith Olejnik , Ellen L Suder , Stephen Ross , Whitney A Scoon , Esther Bullitt , Maria Ericsson , Mitchell R White , Jacquelyn Turcinovic , Tran T N Thao , Ryan M Hekman , Joseph E Kaserman , Jessie Huang , Konstantinos-Dionysios Alysandratos , Gabor E Toth , Ferenc Jakab , Darrell N Kotton , Andrew A Wilson , Andrew Emili , Volker Thiel , John H Connor , Gabor Kemenesi , Daniel Cifuentes , Elke Mühlberger

Epithelial LIF signaling limits apoptosis and lung injury during bacterial pneumonia.

American journal of physiology. Lung cellular and molecular physiology

Avec: Elim Na , Eri Allen , Lillia A Baird , Christine V Odom , Filiz T Korkmaz , Anukul T Shenoy , Adeline M Matschulat , Matthew R Jones , Darrell N Kotton , Joseph P Mizgerd , Xaralabos Varelas , Katrina E Traber , Lee J Quinton

Human pluripotent stem cell modeling of alveolar type 2 cell dysfunction caused by ABCA3 mutations.

The Journal of clinical investigation

Avec: Yuliang L Sun , Erin E Hennessey , Hillary Heins , Ping Yang , Carlos Villacorta-Martin , Julian Kwan , Krithi Gopalan , Marianne James , Andrew Emili , F Sessions Cole , Jennifer A Wambach , Darrell N Kotton

Heat Inactivation of Nipah Virus for Downstream Single-Cell RNA Sequencing Does Not Interfere with Sample Quality.

Pathogens (Basel, Switzerland)

Avec: Adam J Hume , Judith Olejnik , Mitchell R White , Jessie Huang , Jacquelyn Turcinovic , Baylee Heiden , Pushpinder S Bawa , Christopher J Williams , Nickolas G Gorham , Yuriy O Alekseyev , John H Connor , Darrell N Kotton , Elke Mühlberger

SARS-CoV-2 disrupts host epigenetic regulation via histone mimicry.

Nature

Avec: John Kee , Samuel Thudium , David M Renner , Karl Glastad , Katherine Palozola , Zhen Zhang , Yize Li , Yemin Lan , Joseph Cesare , Andrey Poleshko , Anna A Kiseleva , Rachel Truitt , Fabian L Cardenas-Diaz , Xianwen Zhang , Xuping Xie , Darrell N Kotton , Konstantinos D Alysandratos , Jonathan A Epstein , Pei-Yong Shi , Wenli Yang , Edward Morrisey , Benjamin A Garcia , Shelley L Berger , Susan R Weiss , Erica Korb

Human iPSC-hepatocyte modeling of alpha-1 antitrypsin heterozygosity reveals metabolic dysregulation and cellular heterogeneity.

Cell reports

Avec: Joseph E Kaserman , Rhiannon B Werder , Feiya Wang , Taylor Matte , Michelle I Higgins , Mark Dodge , Jonathan Lindstrom-Vautrin , Pushpinder Bawa , Anne Hinds , Esther Bullitt , Ignacio S Caballero , Xu Shi , Robert E Gerszten , Nicola Brunetti-Pierri , Marc Liesa , Carlos Villacorta-Martin , Anthony N Hollenberg , Darrell N Kotton , Andrew A Wilson

Multicompartment duct platform to study epithelial-endothelial crosstalk associated with lung adenocarcinoma.

APL bioengineering

Avec: Keith A Gagnon , Jessie Huang , Olivia T Hix , Veronica W Hui , Anne Hinds , Esther Bullitt , Jeroen Eyckmans , Darrell N Kotton , Christopher S Chen

SARS-CoV-2 Infection of Pluripotent Stem Cell-derived Human Lung Alveolar Type 2 Cells Elicits a Rapid Epithelial-Intrinsic Inflammatory Response.

bioRxiv : the preprint server for biology

Circulating Truncated Alpha-1 Antitrypsin Glycoprotein in Patient Plasma Retains Anti-Inflammatory Capacity.

Journal of immunology (Baltimore, Md. : 1950)

Avec: Emer P Reeves , Danielle M Dunlea , Karen McQuillan , Ciara A O'Dwyer , Tomás P Carroll , Radka Saldova , Prithvi Reddy Akepati , Mark R Wormald , Oliver J McElvaney , Vipatsorn Shutchaidat , Michael Henry , Paula Meleady , Joanne Keenan , Derek C Liberti , Darrell N Kotton , Pauline M Rudd , Andrew A Wilson , Noel G McElvaney

Actionable Cytopathogenic Host Responses of Human Alveolar Type 2 Cells to SARS-CoV-2.

Molecular cell

Avec: Ryan M Hekman , Adam J Hume , Raghuveera Kumar Goel , Kristine M Abo , Jessie Huang , Benjamin C Blum , Rhiannon B Werder , Ellen L Suder , Indranil Paul , Sadhna Phanse , Ahmed Youssef , Konstantinos D Alysandratos , Dzmitry Padhorny , Sandeep Ojha , Alexandra Mora-Martin , Dmitry Kretov , Peter E A Ash , Mamta Verma , Jian Zhao , J J Patten , Carlos Villacorta-Martin , Dante Bolzan , Carlos Perea-Resa , Esther Bullitt , Anne Hinds , Andrew Tilston-Lunel , Xaralabos Varelas , Shaghayegh Farhangmehr , Ulrich Braunschweig , Julian H Kwan , Mark McComb , Avik Basu , Mohsan Saeed , Valentina Perissi , Eric J Burks , Matthew D Layne , John H Connor , Robert Davey , Ji-Xin Cheng , Benjamin L Wolozin , Benjamin J Blencowe , Stefan Wuchty , Shawn M Lyons , Dima Kozakov , Daniel Cifuentes , Michael Blower , Darrell N Kotton , Andrew A Wilson , Elke Mühlberger , Andrew Emili

Derivation of Airway Basal Stem Cells from Human Pluripotent Stem Cells.

Cell stem cell

Avec: Finn J Hawkins , Shingo Suzuki , Mary Lou Beermann , Cristina Barillà , Ruobing Wang , Carlos Villacorta-Martin , Andrew Berical , J C Jean , Jake Le Suer , Taylor Matte , Chantelle Simone-Roach , Yang Tang , Thorsten M Schlaeger , Ana M Crane , Nadine Matthias , Sarah X L Huang , Scott H Randell , Joshua Wu , Jason R Spence , Gianni Carraro , Barry R Stripp , Andras Rab , Eric J Sorsher , Amjad Horani , Steven L Brody , Brian R Davis , Darrell N Kotton

Organoids Model Transcriptional Hallmarks of Oncogenic KRAS Activation in Lung Epithelial Progenitor Cells.

Cell stem cell

Avec: Antonella F M Dost , Aaron L Moye , Marall Vedaie , Linh M Tran , Eileen Fung , Dar Heinze , Carlos Villacorta-Martin , Jessie Huang , Ryan Hekman , Julian H Kwan , Benjamin C Blum , Sharon M Louie , Samuel P Rowbotham , Julio Sainz de Aja , Mary E Piper , Preetida J Bhetariya , Roderick T Bronson , Andrew Emili , Gustavo Mostoslavsky , Gregory A Fishbein , William D Wallace , Kostyantyn Krysan , Steven M Dubinett , Jane Yanagawa , Darrell N Kotton , Carla F Kim

Patient-specific iPSCs carrying an SFTPC mutation reveal the intrinsic alveolar epithelial dysfunction at the inception of interstitial lung disease.

Cell reports

Avec: Konstantinos-Dionysios Alysandratos , Scott J Russo , Anton Petcherski , Evan P Taddeo , Rebeca Acín-Pérez , Carlos Villacorta-Martin , J C Jean , Surafel Mulugeta , Luis R Rodriguez , Benjamin C Blum , Ryan M Hekman , Olivia T Hix , Kasey Minakin , Marall Vedaie , Seunghyi Kook , Andrew M Tilston-Lunel , Xaralabos Varelas , Jennifer A Wambach , F Sessions Cole , Aaron Hamvas , Lisa R Young , Marc Liesa , Andrew Emili , Susan H Guttentag , Orian S Shirihai , Michael F Beers , Darrell N Kotton

Human airway lineages derived from pluripotent stem cells reveal the epithelial responses to SARS-CoV-2 infection.

American journal of physiology. Lung cellular and molecular physiology

Avec: Ruobing Wang , Adam J Hume , Mary Lou Beermann , Chantelle Simone-Roach , Jonathan Lindstrom-Vautrin , Jake Le Suer , Jessie Huang , Judith Olejnik , Carlos Villacorta-Martin , Esther Bullitt , Anne Hinds , Mahboobe Ghaedi , Stuart Rollins , Rhiannon B Werder , Kristine M Abo , Andrew A Wilson , Elke Mühlberger , Darrell N Kotton , Finn J Hawkins

Correction: Recombinant Lloviu virus as a tool to study viral replication and host responses.

PLoS pathogens

Role of spike in the pathogenic and antigenic behavior of SARS-CoV-2 BA.1 Omicron.

bioRxiv : the preprint server for biology

Avec: Da-Yuan Chen , Devin Kenney , Chue-Vin Chin , Alexander H Tavares , Nazimuddin Khan , Hasahn L Conway , GuanQun Liu , Manish C Choudhary , Hans P Gertje , Aoife K O'Connell , Darrell N Kotton , Alexandra Herrmann , Armin Ensser , John H Connor , Markus Bosmann , Jonathan Z Li , Michaela U Gack , Susan C Baker , Robert N Kirchdoerfer , Yachana Kataria , Nicholas A Crossland , Florian Douam , Mohsan Saeed

The COPD GWAS gene ADGRG6 instructs function and injury response in human iPSC-derived type II alveolar epithelial cells.

American journal of human genetics

Avec: Rhiannon B Werder , Kayleigh A Berthiaume , Carly Merritt , Marissa Gallagher , Carlos Villacorta-Martin , Feiya Wang , Pushpinder Bawa , Vidhi Malik , Shawn M Lyons , Maria C Basil , Edward E Morrisey , Darrell N Kotton , Xiaobo Zhou , Michael H Cho , Andrew A Wilson

Lung repair and regeneration: Advanced models and insights into human disease.

Cell stem cell

Avec: Maria C Basil , Konstantinos-Dionysios Alysandratos , Darrell N Kotton , Edward E Morrisey

Generation of human alveolar epithelial type I cells from pluripotent stem cells.

Cell stem cell

Avec: Claire L Burgess , Jessie Huang , Pushpinder S Bawa , Konstantinos-Dionysios Alysandratos , Kasey Minakin , Lauren J Ayers , Michael P Morley , Apoorva Babu , Carlos Villacorta-Martin , Maria Yampolskaya , Anne Hinds , Bibek R Thapa , Feiya Wang , Adeline Matschulat , Pankaj Mehta , Edward E Morrisey , Xaralabos Varelas , Darrell N Kotton

Nuclear size-regulated emergence of topological packing order on growing human lung alveolospheres.

bioRxiv : the preprint server for biology

Avec: Wenhui Tang , Jessie Huang , Adrian F Pegoraro , James H Zhang , Yiwen Tang , Dapeng Bi , Darrell N Kotton , Ming Guo

Pulmonary Fibrosis Stakeholder Summit: A Joint National Heart, Lung, and Blood Institute, Three Lakes Foundation, and Pulmonary Fibrosis Foundation Workshop Report.

American journal of respiratory and critical care medicine

Avec: Sydney B Montesi , Christian R Gomez , Michael Beers , Robert Brown , Ishanu Chattopadhyay , Kevin R Flaherty , Christine Kim Garcia , Brigitte Gomperts , Lida P Hariri , Cory M Hogaboam , R Gisli Jenkins , Naftali Kaminski , Grace Hyun J Kim , Melanie Königshoff , Martin Kolb , Darrell N Kotton , Jonathan A Kropski , Joseph Lasky , Chelsea M Magin , Toby M Maher , Mark McCormick , Bethany B Moore , Cheryl Nickerson-Nutter , Justin Oldham , Anna J Podolanczuk , Ganesh Raghu , Ivan Rosas , Steven M Rowe , William T Schmidt , David Schwartz , Jessica E Shore , Cathie Spino , Matthew Craig , Fernando J Martinez

Réseau de co-auteurs

Jessie Huang 23 collaborations

Carlos Villacorta-Martin 21 collaborations

Konstantinos-Dionysios Alysandratos 14 collaborations

Andrew A Wilson 14 collaborations

Rhiannon B Werder 11 collaborations

Anne Hinds 10 collaborations

Adam J Hume 9 collaborations

Elke Mühlberger 9 collaborations

Esther Bullitt 9 collaborations

Kristine M Abo 7 collaborations

Jonathan Lindstrom-Vautrin 7 collaborations

Finn Hawkins 7 collaborations

Edward E Morrisey 7 collaborations

John H Connor 7 collaborations

Mohsan Saeed 7 collaborations

Andrew Emili 7 collaborations

Konstantinos D Alysandratos 6 collaborations

Mary Lou Beermann 6 collaborations

Michael J Herriges 6 collaborations

Kasey Minakin 6 collaborations

Xaralabos Varelas 6 collaborations

Ellen L Suder 6 collaborations

Judith Olejnik 6 collaborations

Feiya Wang 5 collaborations

Pushpinder Bawa 5 collaborations

Marall Vedaie 5 collaborations

Ruobing Wang 5 collaborations

Gustavo Mostoslavsky 4 collaborations

Laertis Ikonomou 4 collaborations

Jason R Spence 4 collaborations

Pankaj Mehta 4 collaborations

Claire L Burgess 4 collaborations

Apoorva Babu 4 collaborations

Olivia T Hix 4 collaborations

Michael F Beers 4 collaborations

Da-Yuan Chen 4 collaborations

Alexander H Tavares 4 collaborations

Markus Bosmann 4 collaborations

Nicholas A Crossland 4 collaborations

Ignacio S Caballero 4 collaborations

Maria C Basil 4 collaborations

Chantelle Simone-Roach 4 collaborations

Ryan M Hekman 4 collaborations

Taylor Matte 3 collaborations

Aditya Mithal 3 collaborations

Tristan Frum 3 collaborations

Jaymin J Kathiriya 3 collaborations

Maria Yampolskaya 3 collaborations

Bibek R Thapa 3 collaborations

Michael P Morley 3 collaborations

Devin Kenney 3 collaborations

Nazimuddin Khan 3 collaborations

Hasahn L Conway 3 collaborations

Susan C Baker 3 collaborations

Florian Douam 3 collaborations

Jeremy Katzen 3 collaborations

Anjali Jacob 3 collaborations

Yuliang L Sun 3 collaborations

Derek C Liberti 3 collaborations

J C Jean 3 collaborations

Finn J Hawkins 3 collaborations

Marc Liesa 3 collaborations

Eric J Burks 3 collaborations

Baylee Heiden 3 collaborations

Mitchell R White 3 collaborations

Jacquelyn Turcinovic 3 collaborations

Joseph E Kaserman 3 collaborations

Daniel Cifuentes 3 collaborations

Benjamin C Blum 3 collaborations

Liang Ma 2 collaborations

Carmen Mirabelli 2 collaborations

Charles J Zhang 2 collaborations

Christiane E Wobus 2 collaborations

Jonathan Z Sexton 2 collaborations

David A Roberts 2 collaborations

Harold A Chapman 2 collaborations

Adeline M Matschulat 2 collaborations

Aditi Murthy 2 collaborations

Barry R Stripp 2 collaborations

Carla F Kim 2 collaborations

GuanQun Liu 2 collaborations

Manish C Choudhary 2 collaborations

Hans P Gertje 2 collaborations

Aoife K O'Connell 2 collaborations

Alexandra Herrmann 2 collaborations

Armin Ensser 2 collaborations

Jonathan Z Li 2 collaborations

Michaela U Gack 2 collaborations

Robert N Kirchdoerfer 2 collaborations

Yachana Kataria 2 collaborations

Luis R Rodriguez 2 collaborations

Anton Petcherski 2 collaborations

Orian S Shirihai 2 collaborations

Killian Hurley 2 collaborations

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